Gene Ksed_22090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22090 
Symbol 
ID8373712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2286964 
End bp2288061 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content76% 
IMG OID644992451 
ProductABC-type enterobactin transport system, permease component 
Protein accessionYP_003149957 
Protein GI256825997 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.357226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.153637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CACCGCAGCC CACCGCCGCG ACCGGGGCGG GCACCCGGGC CGCGCCGACC 
GCGGCGCCGG AGCACACCGC ATCGGTCCGC GGGGTGAGCC GGCGCCTCGC CCGCCGCCGC
GCGCTGGTGC TGGCCGCGCT GGGCGCACTC GCGCTGGCCC TGTTCGCCGC CCGCGTGCTG
CTGGGCGACT ACACCGTGAC CATCCCGGAC TTCCTGCGCA TCCTGGGCGG GGAGAACATC
CCCGTGGCCA GCTTCCTGGT GATGGAGTCC AAGCTCCCGC GCGCCGCGGT CGCGGTGGTC
GCGGGGCTGG CCTTCGGCGC CGCGGGCGCC ACCTTCCAGT CCGTGCTGCG CAACCCGCTG
GCGAGCCCCG ACGTGGTCGG CGTCAGCCTG GGCGCCAGCT TCGGCGCCGT GTTCTCGATG
GTGGTGCTCG ACTGGGCGGG GACGCCCGTG ATGCTCGCCG CCGCGGCCGG CGGGTTGGCG
GTCACCGGCA CCCTGCTCGC CTTCTCCGGG GGGCGGGGCG CCGGCGCCGC GGCCCACACC
ATGATCCTGG TGGGCATCGG CCTGGGGGCC GCGCTCTCGG CCGGCATCCA CTGGCTGATG
CTGCGCACCG ACGTGCACAA GGCCCAGGAC GCCCTGGTGT GGGTCTCCGG CAGCACCAAC
GACGTGACCT GGCGGCAGAT CGCGGGGCTG GCCGTCGTGG TCGCCGTGCT GCTGCCCCTG
CTGGTGGTGG CCGCCTCGCG CCTGGGCGTC CTCGAGCTCG GCGACGAGCT CGCCACCGGC
CTGGGCGAGC GCCCCACCCG CCTGCGCGGC ACCGTGATGC TGCTGGCGGT GCTGCTGGTC
ACCTCGGCCA CGGCCGTGTG CGGCCCGGTG GCCTTCCTGG CCTTCCTCGC CGGCCCCATC
GCCCGCGCCC TGAACCGCGG CCGCACCACG CTGGTGGGTG CCGGCCTGGT GGGCGCCTGC
ATCTTCCTGG CCGCCGACTA CGTGGGTGCC TACCTGGTGC CCGGCGGCAA CGTGCCGGTC
GGGGTGGTGA CCGGCCTGGC CGGTGGCCCC GCCCTGCTCG CGCTGCTCCT GACCTCCCGG
AGGTGGATGT CCGCATGA
 
Protein sequence
MSAAPQPTAA TGAGTRAAPT AAPEHTASVR GVSRRLARRR ALVLAALGAL ALALFAARVL 
LGDYTVTIPD FLRILGGENI PVASFLVMES KLPRAAVAVV AGLAFGAAGA TFQSVLRNPL
ASPDVVGVSL GASFGAVFSM VVLDWAGTPV MLAAAAGGLA VTGTLLAFSG GRGAGAAAHT
MILVGIGLGA ALSAGIHWLM LRTDVHKAQD ALVWVSGSTN DVTWRQIAGL AVVVAVLLPL
LVVAASRLGV LELGDELATG LGERPTRLRG TVMLLAVLLV TSATAVCGPV AFLAFLAGPI
ARALNRGRTT LVGAGLVGAC IFLAADYVGA YLVPGGNVPV GVVTGLAGGP ALLALLLTSR
RWMSA