Gene Ksed_22050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22050 
Symbol 
ID8373708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2282845 
End bp2283444 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content73% 
IMG OID644992447 
Producttranscriptional regulator 
Protein accessionYP_003149953 
Protein GI256825993 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0903673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC TGACCCCGGA ACGCCGTGCA GCCCAGCGCC AGCGCATCGT CGACGCCGCC 
CGCACCGTCA TGCTCCGCGA GGGACTGCCG GGCACGTCCA TGGCGCAGGT GATCGAGGAG
TCCGGGCTCT CCGCCGGGGC GATCTACGGC TACTTCGCCA GCAAGGACGA GTTGGTGCTG
GGTGTGGCCC TGGACGTCAT CAGCACCCGC CTCTCCGGCA TGGACGAGCT CGCCGCCCGG
CGCCCGGTCC CGCCCCCGGC GCAGGCGCTG GGGGACTTCG TCGAGGCCCT CCCCCGCGGC
GACGAGGGCC GGCTGGTGCT GGAGATCTGG GCCGCCGCCG CCCGCAGCCC CGAGCTGCTG
GAGCGCACCA GCAAGGTGTT CGCCGGCCTC AGCCAGGGCG CCACCGTCTA CCTGGAGGCA
TGGTTCACCG AGGGGATCGG GCTGCCACCG GACGCCGCAA CAGCCCGCAG CCAGGAGGCC
CTGCTCGCAC TGCTGGGCAT CGCCCAGGGC TACATCGTGC AGTCGACCAT CCTGCCCGTG
GATGCCACCG CCTACCGCCG CTCCATCGCA GCACTCCTCG GCGAGCCCGA TGTCGACTGA
 
Protein sequence
MPRLTPERRA AQRQRIVDAA RTVMLREGLP GTSMAQVIEE SGLSAGAIYG YFASKDELVL 
GVALDVISTR LSGMDELAAR RPVPPPAQAL GDFVEALPRG DEGRLVLEIW AAAARSPELL
ERTSKVFAGL SQGATVYLEA WFTEGIGLPP DAATARSQEA LLALLGIAQG YIVQSTILPV
DATAYRRSIA ALLGEPDVD