Gene Ksed_22040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22040 
Symbol 
ID8373707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2281902 
End bp2282753 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content76% 
IMG OID644992446 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003149952 
Protein GI256825992 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0971989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGG CGCACAGCAC CCGGGGGGCC ACGGGTCCCA CCCCCACCGT GGAGCGCGTC 
GGCTCCTACG ACGGCCCGGC GTCCGCCGCC TCTGCCGCAC CCGACGCCCC TCCCGCATCC
GCCGCACCCG ACCCCGCGGT CCGGGTCCGG GGCCTGCGGG TGGTGCGGGG CGGGCGCGAG
GTGCTCCCCG GCATCGACCT CGACGTCCCC GCCGGGCAGG TCACGGGGCT CCTCGGCCCC
TCGGGCAGCG GCAAGTCCAC CCTCATCCGG GCGATCGTCG GGGTGCAGGA GGTCGCTGCC
GGTGCGGTGA CGGTGCTGGG CGAGCCCGCC CGGTCGCCGG CCAACCGGCG CCGGGTGGGC
TACGTGACGC AGTCCCCGGC CGTCTACGCC GACCTGTCCG TGCGCGCGAA CCTGGACTAC
TTCGCCACCC TCGCCGGGTT GCGTGGTCCC GCCCGGGCCG ATGCGGTGGA GCGCACTCTG
GCGCAGGTCG ACCTGGGCTC CCACGCCGGG GCGCGGGTGG CGTCGCTCTC CGGCGGCCAG
GCCTCCCGGG TGTCGCTCGC CGCGGCATTG GTGGCCGACC CGCGGGTGCT GGTGCTGGAC
GAGCCCACGG TCGGGCTGGA CCCGGTGCTG CGACGTTCGC TGTGGGAGCT CTTCGCCGAG
CTCGCGGGCC AGGGGCGGAC GCTGCTGGTC TCCAGCCACG TCATGGACGA GGCAACCCGG
TGCGACCGGT TGCTGCTCCT GCGCGAGGGA CGGGTGCTGG CTGAGCTCAC CCCATCGGAG
CTGCTGGAAC GGACCGGCGC GCAGGACGCC GAGGGGGCCT TCCTCCGGCT GATCGAGGAG
GACGAGCGAT GA
 
Protein sequence
MSPAHSTRGA TGPTPTVERV GSYDGPASAA SAAPDAPPAS AAPDPAVRVR GLRVVRGGRE 
VLPGIDLDVP AGQVTGLLGP SGSGKSTLIR AIVGVQEVAA GAVTVLGEPA RSPANRRRVG
YVTQSPAVYA DLSVRANLDY FATLAGLRGP ARADAVERTL AQVDLGSHAG ARVASLSGGQ
ASRVSLAAAL VADPRVLVLD EPTVGLDPVL RRSLWELFAE LAGQGRTLLV SSHVMDEATR
CDRLLLLREG RVLAELTPSE LLERTGAQDA EGAFLRLIEE DER