Gene Ksed_21600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21600 
Symbol 
ID8373664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2238347 
End bp2239750 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content73% 
IMG OID644992406 
ProductProtein of unknown function (DUF2029) 
Protein accessionYP_003149912 
Protein GI256825952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0988113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00696231 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCGG CGGCCCCGCG GGTGGTTCCC GCGGGGCGTG CTGAGCCCTG GGCCGCGGAC 
CCGGGAGAGC GTCGCGGCAC CTCACCGGCG GTGTGGCTGC CGGCCTTCGT GCTGCTCAGC
GCGGCCGTGC TCACCATGCT CGTGATGCGC GAGGACCCGC CGCTGGACCT GCGGGTCTAC
ACCGGCGGCG TCAGGGCGTT GCTGGAGGGT GACAATGTCT ACAACCTCAC CTACACCAGC
TCACAGCTGA CCTTCACCTA CCCGCCGTTC GCGCTGCTGG CCTTCCTGCC GATGGCCTGG
GTGAGCCCGT GGCTGGGCTC CGCCCTGACC CTGCTGGTCT CGATCGCCTG CGTGGCCTTC
CTGCTGCACG TGGCGCTGGG GCGAGCCGGC GTGGGGGTCG TGGTGGCCAC CGTGATGCTC
GTGGCCGCCA TGGTGGCCGA GCCGGTGTGG CTGACCATGC ACTTCGGACA GGTCAACCTC
ATCCTGGCCG CCCTCATCAC GGCCGACCTC GCCACGGGGC GCGACCGCTG GTGGCGGGGC
GTCGGCCTGG GCATCGCGGC CGGCATCAAG CTCTCGCCGC TCACCTTCCT GGCCTGGCTG
CTCCTGACCC GCCAGTGGCG GGCGGCGGCA GTGGCCACCG GCACCTTCGT GGCCACCATC
GGGGTCTCGT TCGTCGTCAC GCCGGGCACG GCCCGCGCCT TCTGGCTGGA CACGCTCCCT
GCATCGGCCG GCGGGGAGCC CAACCACATG AGCGACGCCA TCGCCCACTC GATGCCCAAG
GAGTACCTGG GCAACCAGTC GGTGATGGGC TTCATGAGCC GCTGGTTCGG GCCCGACACC
GATGCGGCGA CGCTGGCCTG GCTGCTGGTG GGCGGGGTGG TGTCGGTGGC CATCGTGGCC
GTCGGGGCCT GGCTGACCCT CCACGGGGAG CGCGTGCTCG GCTTCTTCGT CGCCTCGCTG
GCGGTGGTGG TGGCCTCGCC GATCGCCTGG ACGCACCACT GGGTGTGGGC CATCCCGCTG
GTGGTGGCGC TGTGGGAGTC CGCGCCGCGG GTGGCACCGC TGCTCCGGTT CAAGGCGGCG
CACCTGCAGG CGCTCGCCGC CGTGGTGGCC CTGGTGCTGG TGGCCGACGC GCACTGGTGG
GCCCCTGCCC GGCGCATGCA GGAGTTGGAC TGGAATCCCC TGCAGATGAT CGTCGGCAAC
GACTACCTGC TCATGTTCCT GCTGCTTCTC GGGGTGCTCG GCGCCGGCGT GCTGCGCGGC
GGGCCGAGCA CCGCCTGGCG CGCCGCTCCG GCCGGCGCGC AGGGGGCCGG CGTCGCGGGC
CCGACCGCAT CGCGCCCGGC CGTGGCGGGT CAGTCGCCGG TCACCAGCGC GTCCGGCACC
TCCTCGGCAT CGAGGATGCG GTAG
 
Protein sequence
MTAAAPRVVP AGRAEPWAAD PGERRGTSPA VWLPAFVLLS AAVLTMLVMR EDPPLDLRVY 
TGGVRALLEG DNVYNLTYTS SQLTFTYPPF ALLAFLPMAW VSPWLGSALT LLVSIACVAF
LLHVALGRAG VGVVVATVML VAAMVAEPVW LTMHFGQVNL ILAALITADL ATGRDRWWRG
VGLGIAAGIK LSPLTFLAWL LLTRQWRAAA VATGTFVATI GVSFVVTPGT ARAFWLDTLP
ASAGGEPNHM SDAIAHSMPK EYLGNQSVMG FMSRWFGPDT DAATLAWLLV GGVVSVAIVA
VGAWLTLHGE RVLGFFVASL AVVVASPIAW THHWVWAIPL VVALWESAPR VAPLLRFKAA
HLQALAAVVA LVLVADAHWW APARRMQELD WNPLQMIVGN DYLLMFLLLL GVLGAGVLRG
GPSTAWRAAP AGAQGAGVAG PTASRPAVAG QSPVTSASGT SSASRMR