Gene Ksed_21260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21260 
Symbol 
ID8373630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2193042 
End bp2193797 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content76% 
IMG OID644992373 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003149880 
Protein GI256825920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.646658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.296128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACCC TGCCGCACGG CGCCGCGCGC CGGATCGACG GACGGACCAC ACGGTGGGAC 
GCCCACCGGG CGCGACGCCG GGCCGAGCTG ACCCAGGCGG CCCTGCGCGC ACTGCGCCGG
CACGGTCCCG GCATCGGCAT GGAGGAGATC GCCGCGGAGG CCTGCACCTC CCGCACCGTG
CTCTACCGGC ACCTCGGTGA CCGGGCCGGC GCCTGGCGCG CCGTCATCGA GTCCGTCGAC
GCCCTGGTCT GGGGCGACAT GGCCGCCGCC ACCGAGGCCG CCGGCACCCA GCGGAGCCCG
CGGACGGTGA TCGCGGCCAT CACCGACTCC TACCTGGCCC TCGTGGAGCG GGACCCCGAG
ATCTACCGCT TCGTCGTGAC CCGTCCGCTC AACGACACCG ACGGGGACGA CCCCGTGGCC
GGCATGTCGA GCCGCATGGG CGAACGCCTC ACCCCGGTGA TGGAGCACCT GCTGCGGACC
GCCGCACGCG CCGGCGGGGC AGCCGGGGCG GCGTCCGTGA CCAGCGAGAC CGCGCGCACC
CTGGCCCACG GGCTGGTGGG CCTGGTGCGC TTCGTCTGCG AGGACTGGGT CTCCCGCCAC
GACCGCCCGC CCCGTGAGCA GCTGGTGAAC GAGGTGGCCG AGCTCTTCGG CGCGCGCTTC
GACGCGATCG CCGCCGGGCC CGCCACGCCC CGTGCCGCCC AGCCGGGCCC CCAGGACACA
CCCTGCACGC ACCCCACCCC AGGAGCGACC CGATGA
 
Protein sequence
METLPHGAAR RIDGRTTRWD AHRARRRAEL TQAALRALRR HGPGIGMEEI AAEACTSRTV 
LYRHLGDRAG AWRAVIESVD ALVWGDMAAA TEAAGTQRSP RTVIAAITDS YLALVERDPE
IYRFVVTRPL NDTDGDDPVA GMSSRMGERL TPVMEHLLRT AARAGGAAGA ASVTSETART
LAHGLVGLVR FVCEDWVSRH DRPPREQLVN EVAELFGARF DAIAAGPATP RAAQPGPQDT
PCTHPTPGAT R