Gene Ksed_20390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20390 
Symbol 
ID8373543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2116972 
End bp2117796 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content72% 
IMG OID644992288 
Productflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase 
Protein accessionYP_003149798 
Protein GI256825838 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.173262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.119903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACG AGAACCCGCT CTACCTCGCC GAGGAAGCAG CCGCGCTGGA CCTCTTGGCC 
GACGGCCGCG TGGCCCTGGG CGTCTCCCGA GGCAGCCCCG AGCCGGCGGA CCGCGGATGG
GAAGCCTTCG GGTACACCGG GTCCACCGAC CCGCGCGGGG CAGACATCGC TCGCGCCAAG
TTCGAGCTGT TCCGCAAGGC CATCTCCGGC GAGCCCATGG CCCGTGCAGC CGAGCAGCCC
TACGGCGCCC CGGTGCGCCC GGGCCAGGGC CTGCGGGTCG AGCCGCACTC CGAGGACCTC
GTGCGCCGCA TCTGGTGGGG CGCCGGTTCC CGCGAGACCG CGGAGAGCAC CGGCCGCCAG
GGGCTGAACC TCATGAGCTC CACCCTGCTC ACCGAGGCCA CGGGCGCGTC CTTCGGTGAC
CTGCAGGCCG AGCAGATCGA GCGCTACCGC GCTGCGTTCC GCGAGGCCGG GCACACGCAC
ACCCCGCGGG TCTCGGTTTC CCGGAGCGTC TTCCCCATCG TCACGCAGCA GGACAAGATG
CTGTTCGGGG TGCGCGGCGG CCAGGACGGG GACCAGATCG GCATCATCGA CGGCCACCGG
TCGACCTTCG GGCGGACCTA CGCCGGGGAG CCGGACGAGC TCATCGAGCA GCTCCAGGCC
GATGCGGCGG TGCAGGCAGC GGACACGCTC ATGTTGACCA TCCCCTCACA GGCCGGGGTG
GACCTCAACC TGCACATCCT GGAGAGTTTC GCCCAGCACG TGGCCCCGGC CCTGGGCTGG
AAGCCCAACA CCGAGGGTCC CGTGCAGGGC GACCCGGTGT CCTGA
 
Protein sequence
MRYENPLYLA EEAAALDLLA DGRVALGVSR GSPEPADRGW EAFGYTGSTD PRGADIARAK 
FELFRKAISG EPMARAAEQP YGAPVRPGQG LRVEPHSEDL VRRIWWGAGS RETAESTGRQ
GLNLMSSTLL TEATGASFGD LQAEQIERYR AAFREAGHTH TPRVSVSRSV FPIVTQQDKM
LFGVRGGQDG DQIGIIDGHR STFGRTYAGE PDELIEQLQA DAAVQAADTL MLTIPSQAGV
DLNLHILESF AQHVAPALGW KPNTEGPVQG DPVS