Gene Ksed_19770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19770 
Symbol 
ID8373481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2061011 
End bp2062165 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content71% 
IMG OID644992230 
Productflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase 
Protein accessionYP_003149740 
Protein GI256825780 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.000302603 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0229547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCG GCATCTTCAC CATTGGGGAC GTCACCACCG ACCCCACGGC CGGCCGCACC 
CCCACCGAGA ACGAGCGCAT CCGCAACACG GTGGAGATCG CCCTCAAGGC CGAGGAGATC
GGCCTGGACG TCTTCGCCAC CGGTGAGCAC CACAACCCGC CGTTCATCGC GCCGGCCAAC
CCGCCGATCC TCATGGCGGC CATCGCCGCG CAGACCAAGC GCCTGCAGCT CACCACCGCG
ACCACCCTCA TCACCACCAA CGACCCGGTG CGCCTCGCCG AGGACTACGC CTACGTGCAG
CACCTCTCCA GCGGCCGCGT CGACCTGATG CTGGGCCGCG GCAACACCGG CCCGGTCTAC
CCCTGGTTCG GCAAGGACAT CCGCGAGGGC GTGAACCTCG CCATCGAGAA CTACGCCCTG
CTGCACAAGC TGTGGCGCGA GGAGGAGGTC ACCTGGCAGG GCCGCTACCG CACGCCGCTG
CACAGCTTCA CGGCCACCCC GCGCCCGCTG GACGGCATCC CGCCCTTCGT GTGGCACGGC
TCCATCCGCT CGCCGGAGAT CGCCGAGCAG GCCGCGTACT ACGGCAACGG GTTCTTCGCC
AACCACATCT TCTGGCCGGC CCACCACACC CAGCAGATGG TGGAGCGCTA CCGCCAGCGC
TTCGCCCACT ACGGCCACGG CACCCCCGAG CAGGCGATCG TCGGCCTGGG CGGCCAGTTC
TTCATGCGCC GCAACAGCCA GGACGCCGTG CGCGAGTTCC GCCCGTACTT CGACAACGCG
CCGGTGTACG GCGGGGGCCC CTCGCTGGAT GAGTTCTCGC GCAACACGCC GCTGACCGTC
GGCAGCCCGC AGGAGGTCAT CGAGCGCACC CTGTCCTTCC GCGAGTACGT GGGCGACTAC
CAGCGCCAGC TCTTCCTCAT CGACCACGCG GGGCTGCCCC AGAAGGTCGT GCTCGAGCAG
CTGGACCTGC TCGGGGAGAT CCTGCCCACG CTCCGCAAGG AGTTCGATGC GGTGCGCGCC
CCCGGCGTGC CCGACGCCCC CACCCACGCC GCCGCCCTGG CCGCCGGCCG GGGCACGCAG
GCCGCAGCCA CGCCCGCCAC GGACCGCTGG ACCGGCACCC GGGCGGAGGA CCACAACACC
CTGGAGGCCG ACTGA
 
Protein sequence
MQFGIFTIGD VTTDPTAGRT PTENERIRNT VEIALKAEEI GLDVFATGEH HNPPFIAPAN 
PPILMAAIAA QTKRLQLTTA TTLITTNDPV RLAEDYAYVQ HLSSGRVDLM LGRGNTGPVY
PWFGKDIREG VNLAIENYAL LHKLWREEEV TWQGRYRTPL HSFTATPRPL DGIPPFVWHG
SIRSPEIAEQ AAYYGNGFFA NHIFWPAHHT QQMVERYRQR FAHYGHGTPE QAIVGLGGQF
FMRRNSQDAV REFRPYFDNA PVYGGGPSLD EFSRNTPLTV GSPQEVIERT LSFREYVGDY
QRQLFLIDHA GLPQKVVLEQ LDLLGEILPT LRKEFDAVRA PGVPDAPTHA AALAAGRGTQ
AAATPATDRW TGTRAEDHNT LEAD