Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_19670 |
Symbol | |
ID | 8373472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 2050045 |
End bp | 2050992 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644992222 |
Product | ectoine hydroxylase |
Protein accession | YP_003149732 |
Protein GI | 256825772 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | [TIGR02408] ectoine hydroxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00431425 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGACCACCA CGAGTGTCAA GCCCATCGCA CCATCCGCCC GGCCGGGTGA CACGGCCGAG CCCCACGACC GGTACCCCAC CCGTACGGGC GATCGCCCCG CGGTCCTGGA ACGCACTGAC CCGGTCGTGG TGGGAGGCCC GGATGACGGC CCCTTCGACG GACGCGAGCT CGACCACATC GAGACCGCGG GCTACGCCCA GGTGCCGGAA CTGTTCTCCC CTGTCGAGAT CAACCGCATG CGCGAGGAGT TGGACGTTCT CTCCCGGGAC GAGCACGTCT TGGCCGACGA GCGCACCATC ACCGAGGCCG GGAGCGGACA GCTCCGCACG GTCTTCGAAG TGCACCGCTC GAACGAGTTG TTCCGCTCGG TGGCCCACGA CCCGCGACTG GTGGCCCGGG CCGAGCAGGT GCTCGGCGGG CCGGTGACCA TCCACCAGAG CCGGGTGAAC TTCAAGCCGG GCTTCGCGGG CAAGGAGTTC TCGTGGCACT CGGACTTCGA GACCTGGCAC GCGGAGGACG GGATGCCCAC CCCGCGGGCG ATCAGCGTCT CGATCGCCCT GACCGACAAC CACACGTACA ACGGCCCGCT GATGATCATG CCGGGCTCGC ACCGCCACTA CGTGTCGTGC GTCGGTGAGA CACCCGAGGA CAACTACAAG TCCTCGCTGG TGATGCAGGG AGCCGGCACG CCGGATCAGG ACGTCCTCAC CCGCATGTAC GAGCGCCACG GCATCGACGT GCTGACGGGC GCCGCCGGTG GAGCCACCTG GTTCGACTCG AACTGCATGC ACGCCTCGAA CGGCAACATC ACCCCCGCGC CCCGGTCGAA CGTTTTCATC GTGTTCACCG CGGCGGACAA CCAGTGCGGT GAGCCCTTCG CAGCGCCTGC CCCCCGCCCG GAGTTCCTGG GCGCACGGCG GGAGCGCGAG ATCCTGACGA CGCGGTGA
|
Protein sequence | MTTTSVKPIA PSARPGDTAE PHDRYPTRTG DRPAVLERTD PVVVGGPDDG PFDGRELDHI ETAGYAQVPE LFSPVEINRM REELDVLSRD EHVLADERTI TEAGSGQLRT VFEVHRSNEL FRSVAHDPRL VARAEQVLGG PVTIHQSRVN FKPGFAGKEF SWHSDFETWH AEDGMPTPRA ISVSIALTDN HTYNGPLMIM PGSHRHYVSC VGETPEDNYK SSLVMQGAGT PDQDVLTRMY ERHGIDVLTG AAGGATWFDS NCMHASNGNI TPAPRSNVFI VFTAADNQCG EPFAAPAPRP EFLGARRERE ILTTR
|
| |