Gene Ksed_19670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19670 
Symbol 
ID8373472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2050045 
End bp2050992 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content69% 
IMG OID644992222 
Productectoine hydroxylase 
Protein accessionYP_003149732 
Protein GI256825772 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID[TIGR02408] ectoine hydroxylase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00431425 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCACCA CGAGTGTCAA GCCCATCGCA CCATCCGCCC GGCCGGGTGA CACGGCCGAG 
CCCCACGACC GGTACCCCAC CCGTACGGGC GATCGCCCCG CGGTCCTGGA ACGCACTGAC
CCGGTCGTGG TGGGAGGCCC GGATGACGGC CCCTTCGACG GACGCGAGCT CGACCACATC
GAGACCGCGG GCTACGCCCA GGTGCCGGAA CTGTTCTCCC CTGTCGAGAT CAACCGCATG
CGCGAGGAGT TGGACGTTCT CTCCCGGGAC GAGCACGTCT TGGCCGACGA GCGCACCATC
ACCGAGGCCG GGAGCGGACA GCTCCGCACG GTCTTCGAAG TGCACCGCTC GAACGAGTTG
TTCCGCTCGG TGGCCCACGA CCCGCGACTG GTGGCCCGGG CCGAGCAGGT GCTCGGCGGG
CCGGTGACCA TCCACCAGAG CCGGGTGAAC TTCAAGCCGG GCTTCGCGGG CAAGGAGTTC
TCGTGGCACT CGGACTTCGA GACCTGGCAC GCGGAGGACG GGATGCCCAC CCCGCGGGCG
ATCAGCGTCT CGATCGCCCT GACCGACAAC CACACGTACA ACGGCCCGCT GATGATCATG
CCGGGCTCGC ACCGCCACTA CGTGTCGTGC GTCGGTGAGA CACCCGAGGA CAACTACAAG
TCCTCGCTGG TGATGCAGGG AGCCGGCACG CCGGATCAGG ACGTCCTCAC CCGCATGTAC
GAGCGCCACG GCATCGACGT GCTGACGGGC GCCGCCGGTG GAGCCACCTG GTTCGACTCG
AACTGCATGC ACGCCTCGAA CGGCAACATC ACCCCCGCGC CCCGGTCGAA CGTTTTCATC
GTGTTCACCG CGGCGGACAA CCAGTGCGGT GAGCCCTTCG CAGCGCCTGC CCCCCGCCCG
GAGTTCCTGG GCGCACGGCG GGAGCGCGAG ATCCTGACGA CGCGGTGA
 
Protein sequence
MTTTSVKPIA PSARPGDTAE PHDRYPTRTG DRPAVLERTD PVVVGGPDDG PFDGRELDHI 
ETAGYAQVPE LFSPVEINRM REELDVLSRD EHVLADERTI TEAGSGQLRT VFEVHRSNEL
FRSVAHDPRL VARAEQVLGG PVTIHQSRVN FKPGFAGKEF SWHSDFETWH AEDGMPTPRA
ISVSIALTDN HTYNGPLMIM PGSHRHYVSC VGETPEDNYK SSLVMQGAGT PDQDVLTRMY
ERHGIDVLTG AAGGATWFDS NCMHASNGNI TPAPRSNVFI VFTAADNQCG EPFAAPAPRP
EFLGARRERE ILTTR