Gene Ksed_19630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19630 
Symbol 
ID8373468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2046439 
End bp2047536 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content73% 
IMG OID644992218 
Productaspartate semialdehyde dehydrogenase 
Protein accessionYP_003149728 
Protein GI256825768 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00392335 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCAACT CCCCCCGCCC CACCATCGCC GTCGTCGGCG CGACCGGGCA GGTCGGCACC 
GTGATGCTGA AGCTGCTGAC CGAGCGCTCG GTGCCGGTCG GCACGCTGCG CCTGTTCGCC
TCGTCCCGCT CGGCCGGCAA GGTCATGGAG TGGACCGACG GGCAGGGCAC CACCCACCAG
ATCACCGTCG AGGACGTGGC GGCCACCTCC ACCGAGGACC TGCGCGGCAT CGACATCGCC
CTGTTCTCGG CCGGCGGCAG CACCTCGAAG GAGCACTCCC CCCGCTTCGC CGAGGCCGGC
GCCGTGGTCG TGGACAACTC CTCGGCCTTC CGCCGCGACC CCGAGGTGCC GCTGGTGGTC
AGCGAGGTGA ACCCGCAGGC CGCCACCGAG CGCCCCAAGG GCATCATCGC CAACCCCAAC
TGCACCACCA TGGCCGCGAT GCCGGTGCTC AAGGCCCTGC ACGACGCCGC CGGCCTGGCA
CGTCTGCAGG TGGCCACGTA CCAGGCGGTC TCCGGCTCCG GCCTGGCCGG CGTGGACGAG
CTCGCGGGCC AGGTGCGCGC CGCGACCGGC GCCGGCGAGG GCGCGCTGGA GTCCCTGGTG
CACGACGGCC ACGCCCTGGA CGCGGAACTG CCCGAGCCCT CGGCGTACGC GGCCCCCATC
GCGTTCAACG CGCTCCCGCT GGCCGGGTCG GTCGTCGAGG ACGGCTCCGA GGAGACCGAC
GAGGAGCAGA AGCTCCGCAA CGAGTCCCGC AAGATCCTGG GGCTGCCCGA CCTGCTGGTC
TCCGGCACCT GCGTGCGCAT TCCGGTGATG ACCGGCCACG CGCTGGCGGT GCACGCCCAG
TTCGACCGCG CCATCGACGC CGAGGAGGCA CGGACGCTGC TGCAGGAGGC CCCGGGCGTG
CAGCTGGCCG ACCTACCCAC CCCGCTCGAG GCGACCGGCA TCGACGACGT CCTGGTGGGC
CGCGTGCGCG CCGACCAGTC CGTGCCCGAC GGCAAGGGCC TGGTGCTCTT CGTCGCCGGC
GACAACCTCC GCAAGGGTGC GGCCCTGAAC GCTGTCCAGG TGGCCGAGGT CCTCATCGAG
CAGGGGGTGG GCGCATGA
 
Protein sequence
MSNSPRPTIA VVGATGQVGT VMLKLLTERS VPVGTLRLFA SSRSAGKVME WTDGQGTTHQ 
ITVEDVAATS TEDLRGIDIA LFSAGGSTSK EHSPRFAEAG AVVVDNSSAF RRDPEVPLVV
SEVNPQAATE RPKGIIANPN CTTMAAMPVL KALHDAAGLA RLQVATYQAV SGSGLAGVDE
LAGQVRAATG AGEGALESLV HDGHALDAEL PEPSAYAAPI AFNALPLAGS VVEDGSEETD
EEQKLRNESR KILGLPDLLV SGTCVRIPVM TGHALAVHAQ FDRAIDAEEA RTLLQEAPGV
QLADLPTPLE ATGIDDVLVG RVRADQSVPD GKGLVLFVAG DNLRKGAALN AVQVAEVLIE
QGVGA