Gene Ksed_19470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19470 
Symbol 
ID8373452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2026206 
End bp2027492 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content66% 
IMG OID644992202 
Productcitrate synthase 
Protein accessionYP_003149712 
Protein GI256825752 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.286826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00826117 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCCG ACAAGGCACC CGCCACCTTC ACCCACGAGG ACGTCACGCT GGAGTTCCCC 
TTCATCGCGT CCGTCGAGGG TGACAACGGC TACGACATCT CCGCCCTCCG CAAGGAGACC
GGCAACGTGA CCCTCGACGT GGGTTTCGTG AACACGGCCT CGTGCTCCTC GGCGATCACG
TTCATCGACG GCGACGAGGG GATCCTGAGG TACCGCGGCT ACCCCATCGA GCAGCTGGCC
GAGAAGTCCA CCTTCATGGA GGTCGCCAAG CTGCTGATGG ACGGTGAGCT CCCCTCCGAG
CGGGAGCTCG AGTCCTTCCG CGAAGACGTC CGCGCCCGCG CCGAGATGCC CGAGGGCATG
AAGGACTTCT TCAAGTCCTT CCCCACCGAC GCCCACCCGA TGCCGGTGCT CTCCTCGGCG
ATCTCCGCCC TGTGCACCTA CGACACCGAG AACCTCGACC CCTTCGACCC CGAGCAGCTG
GAGAACGCCT CCCGCCGCCT GATGGGGCAG GTGCCGGTGC TGGCCGCCAA CGCCTACCGC
AACCGCCAGG GCCTCCCGCC GATGCAGGCC GACACCAGCC TGACCGTGGT GGAGAACTTC
CTGCGCATGA CCTTCGCGGA CGCCGAGGGC AACTACGAGC TCGACGAGCG CATGGTCCGC
GCGTTGGACA TGCTCTTCGT GCTGCACGCC GACCACGAGC AGAACTGCTC CACCTCCACG
GTGCGCCTGG TCGGGTCGGC CAACACCAAC CTCTACGGCT CCATCTCCGC CGGTGTGCAG
GCCCTGTGGG GCCCGCTGCA CGGGGGTGCC AACCAGGCCG TGCTGGAGAT GCTCGAGGAG
ATCCAGAACC TCGAGGGCGG TGTCGAGGAG TTCGTCCGCA AGGTTAAGAA CAAGGAGGAC
GGCGTCAAGC TGATGGGCTT CGGCCACCGG GTCTACAAGA ACTACGACCC GCGCGCCGCC
ATCGTGAAGA AGACCGCCGA CGAGGTGCTG GAGCACCTGG GCGCCGGGGA CGAGCAGCTC
GAGATCGCCA TGCAGCTGGA GAAGGTCGCC CTCGAGGACG ACTACTTCGT GCAGCGCAAG
CTCTACCCGA ACGTGGACTT CTACACCGGC CTGATCTACC AGGCCATGGG CTTCCCGACC
GACATGTTCA CGGTGCTGTT CGCCATCGGC CGTCTGCCCG GCTGGATCGC CCAGTACCGC
GAGATGATCA ACGACGAGAA CACCAAGATC GGCCGCCCGC GCCAGATCTA CACCGGTTCG
GAGCAGCGGG ACTACCCCAC CGCCTGA
 
Protein sequence
MTADKAPATF THEDVTLEFP FIASVEGDNG YDISALRKET GNVTLDVGFV NTASCSSAIT 
FIDGDEGILR YRGYPIEQLA EKSTFMEVAK LLMDGELPSE RELESFREDV RARAEMPEGM
KDFFKSFPTD AHPMPVLSSA ISALCTYDTE NLDPFDPEQL ENASRRLMGQ VPVLAANAYR
NRQGLPPMQA DTSLTVVENF LRMTFADAEG NYELDERMVR ALDMLFVLHA DHEQNCSTST
VRLVGSANTN LYGSISAGVQ ALWGPLHGGA NQAVLEMLEE IQNLEGGVEE FVRKVKNKED
GVKLMGFGHR VYKNYDPRAA IVKKTADEVL EHLGAGDEQL EIAMQLEKVA LEDDYFVQRK
LYPNVDFYTG LIYQAMGFPT DMFTVLFAIG RLPGWIAQYR EMINDENTKI GRPRQIYTGS
EQRDYPTA