Gene Ksed_19430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19430 
Symbol 
ID8373448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2023577 
End bp2024392 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content74% 
IMG OID644992198 
Productenoyl-CoA hydratase/carnithine racemase 
Protein accessionYP_003149708 
Protein GI256825748 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0126218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACC AGCCCGCCCC CACCGACCAG CCCGACCAGC CCGTCCTGCT CGACCTCACC 
GACGGGGTCG CGACGGTCAC CATCAACCGC CCCGACGCCA TGAACGCGGT GGACACGGCC
GTGAAGGAGG GGCTGCTGCA GACCCTGCAG CAGGTGGCCG AGGACCCGCT GGCCCGGGCC
GTGGTGCTCA CCGGGGCCGG GGACCGCGCC TTCTGCGTGG GGCAGGACCT CAAGGAGCAC
ATCCGCCTGC TCGACGAGCC GGACCCGTGG GCGACCGTGA CCGACCACTA CAACCCCATC
GTGACCCTGC TGGCAGGCAT GGACAAGCCC GTGATCGCCC GCATCAACGG CGCCTGTGCC
GGCGCCGGCG CGGCCTTCGC CATGGCCTGC GACCTGCGGA TCATGGCTGA GGGGGCCGCC
GTCACCTTCG CGTTCTCCGG CATCGGGCTC TCGTGCGACT CCGGCACCAG CTGGCACCTG
CCGCGGCTGG TGGGGCCGGC CCGGGCCACC GAGCTGCTCA TGCTGGGCGC CAAGCTCTCC
GCGACCGAGG CCCTCGAGAT GGGGCTCGTG GGCACCGTGG TGCCGGCCGC GGAGCTGGAC
CAGGCCGTGG ACGCGCTCGC CCAGCGCCTG GCGCAGGGAC CCACGCTGGC CTTCGCCGGC
ATCAAGTCCT CGCTGCGCAC CGCCCAGGGG ACGGACCTGG CCGGCGCGCT GGCCTTCGAG
GCCACGCAGA TGAAGCGCAC CGGGTCCAGC CGCGACCACC GCGGCGCCGT GCAGGCCTTC
CTGGCCAAGG AGCAGCCGGT CTTCACCGGC GAGTGA
 
Protein sequence
MSDQPAPTDQ PDQPVLLDLT DGVATVTINR PDAMNAVDTA VKEGLLQTLQ QVAEDPLARA 
VVLTGAGDRA FCVGQDLKEH IRLLDEPDPW ATVTDHYNPI VTLLAGMDKP VIARINGACA
GAGAAFAMAC DLRIMAEGAA VTFAFSGIGL SCDSGTSWHL PRLVGPARAT ELLMLGAKLS
ATEALEMGLV GTVVPAAELD QAVDALAQRL AQGPTLAFAG IKSSLRTAQG TDLAGALAFE
ATQMKRTGSS RDHRGAVQAF LAKEQPVFTG E