Gene Ksed_19090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19090 
Symbol 
ID8373414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1984626 
End bp1986233 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content73% 
IMG OID644992164 
Producthypothetical protein 
Protein accessionYP_003149674 
Protein GI256825714 
COG category[S] Function unknown 
COG ID[COG5282] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03624] putative hydrolase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0288289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.173711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG ACAACCTGCC CCAGGGCAGC TCGGGCGCCG ACGACGGCGA GAACCCGGAC 
GGCGAGGGGT CGGGCAACGA CCCCATGAAG GACATGCTCC GGCAGTTCCT CGGCGACGCC
GTGGACTCCC CGGAGGTGGA CGAGATGCTC TCGGCCCTGG GGCTGAACGG CGCGGGCGCC
CCCGGTGCCG GTGCTGGTGG CGGCGCGATG GGGGGCAACC CGATGGCCGC GATGATGGCC
AACAACCCGG CCGCCTTCGG CGCCATGCAG GCGCAGTTCC AGCAGATGTT CGCCGGCGGT
GACGAGGCCG TGAACGCCAC CCTCGCCACC GACGTCGCCC GCCGCGCCGC CGCCCAGGGT
GGCGACTCCT CGGTGGGCGA GGCCTCGCAG CGCGACGTGG AGCAGGTGAG CAACGTGGCC
TCGCTGTGGC TGGACGCCGT CACCGAGTTC CCCGCCCTGG ACGGACCCGC CCGCGTCGTG
AGCCGCGCCG AGTGGGTGGA GAGCACCATG CCCTCCTGGG TGGAGGCCCT CACCCCCCTG
GCCGATGGGG TGAACGACGC CGTGAGCGCC TCGCTCACCG ACCGCCTCGG CGACGACCCC
GAGGCCCTGC AGCAGCAGCT CCCGCCGGGT ATGGGCCTGC CACCGGGTGT GGACATGAGC
GCGATCATGG GGCAGATGGC GCCGATGATG CGCAAGATGT CCAGCTCCAT GTTCTCCATG
CAGCTGGGCC AGGCCGCCGG CGCGCTGAGC CACGAGGTGG TCTCCGGCAC CGACGTCGGC
CTGCCCCTGG TGGGCGGTGA GCAGGTGCTG ATGCTGCCGG CGAACGTGCG GGACTTCGCC
GAGGGCCTGG AGATCGACCC GGCCGAGGTG ATGCTCTTCC TGACCGTGCG CGAGAGCGCC
CGCCAGCGCC TCTACGCCGG CGCCCCGTGG GTGCGCAGCC AGGTGCTCGA GGCCGTGCGG
GCGTACGCCG CGGACATGCG CCTGGACACC GAGGGCATCG AGTCCAAGGT GGCCCAGGTG
GACCCGACCG ATCCCGAGGC CATGCAGAAG GTGCTGGCCG ACGGGCTGTT CCACCCCGAG
CCGAGCGAGT CCCAGAAGGC GGCCCTCACG CGGCTGGAGA CCTGGCTGGC CCTGGTGGAG
GGCTGGGTGG ACGTGGTTAC CGACCGCGCC ACCCGCGGGA CGCTGCCCCA CGCCGACGCG
CTGGCCGAGG TGGTCCGCCG CCGCCGCGCC ACGCAGGGCC CGGCCGAGAA GACCTTCTCC
GGGCTGGTGG GACTGGAGCT GCGCCCCCGC CGGATGCGGG ACGCCGCCAA CCTGTTCGCC
GCCATGGAGG ACAAGCACGG TGCCGCTGCG CGCGATGCGG TCTGGGACCA CCCGGACGTA
GCCCCCGATG CGGCCGCCCT GGACGATGTC CTGGGCTTCG TGCAGGCCTG GGGCACCTCT
GCCCCCGGCG AGATCACGGG CACTGACTTC GACACCGAGC TGGCCAAGCT GCTCGATGCC
GAGGGCAGCG GTCCGGGCGG TCTGAGCGGG TCCACCGGTC CGGCCGGGGA CGGCCCCACG
CAGGGCGACG GCGACGACTC CGGTCAGGAC GGCCCCGCCA AGGGCTGA
 
Protein sequence
MSQDNLPQGS SGADDGENPD GEGSGNDPMK DMLRQFLGDA VDSPEVDEML SALGLNGAGA 
PGAGAGGGAM GGNPMAAMMA NNPAAFGAMQ AQFQQMFAGG DEAVNATLAT DVARRAAAQG
GDSSVGEASQ RDVEQVSNVA SLWLDAVTEF PALDGPARVV SRAEWVESTM PSWVEALTPL
ADGVNDAVSA SLTDRLGDDP EALQQQLPPG MGLPPGVDMS AIMGQMAPMM RKMSSSMFSM
QLGQAAGALS HEVVSGTDVG LPLVGGEQVL MLPANVRDFA EGLEIDPAEV MLFLTVRESA
RQRLYAGAPW VRSQVLEAVR AYAADMRLDT EGIESKVAQV DPTDPEAMQK VLADGLFHPE
PSESQKAALT RLETWLALVE GWVDVVTDRA TRGTLPHADA LAEVVRRRRA TQGPAEKTFS
GLVGLELRPR RMRDAANLFA AMEDKHGAAA RDAVWDHPDV APDAAALDDV LGFVQAWGTS
APGEITGTDF DTELAKLLDA EGSGPGGLSG STGPAGDGPT QGDGDDSGQD GPAKG