| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_19080 |
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| Symbol | |
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| ID | 8373413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 1983416 |
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| End bp | 1984540 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644992163 |
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| Product | predicted secreted protein containing a PDZ domain |
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| Protein accession | YP_003149673 |
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| Protein GI | 256825713 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.0257465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.465103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGG CGCCCGACTC CGACCACGGC AGCACACGTG GGCGGTCCCG CTCGGCGGGC
CGCCGGCTGG GGGCGGTCCT CCTGCTGGTG GGCGCCCTGG CCGTCGTGCT GGCCGTGCTC
CTGTCCAACC TCATCACAGC CCCCTACGTG GTGTTCAAGC CGGGCCACGC CTACGACGTG
CTCTCCGAGG ACGGTCCAGG TGACGCTCCG ATGATCAGCG TCGATGGCCA CGAGACCCAC
CCCACAGAGG GCGCCCTGCG CATGACCACC ATCTCCATGT ACGGCGGCCC GGGGCACGAG
GTGAGCTGGT GGGACCTCGC CGGGTCCTGG CTGGGGGGCG AGGACGAGAT CCTGCCGCGC
AGCCAGGTCT TCCCCGAGAA GGTCACCGAG CAGGAGGTCG AGCAGGTCAG CACCGCCCAG
ATGGTGGGCT CGCAGTCCGG GGCGGCGACC GTGGCGCTGC GCGCGGCCGG CATCGAGGTC
AGCGAGGAGG TCGTCGTGGC GCAGGTGATG CCCGACGCCC CGGCCGAGGG TGTGCTGGAG
GCCGAGGACG TCATCCTGTC CGTCGACGGG GTCAAGGCGA CCGCGCTGGA GGCCGTCCAG
CAGGCCATCC AGGAGGTCGA CCCGGGCGAT GAGGTGACCG TGGAGGTGGA GCGCGACGGC
TCCACCAAGA CCCTCAAGGT GCCCACCACC GAGATGGAGG GCCGCACCGT CGTGGGTGTG
GGGCTGGCCA CGATGGCCGA GAGTGACGTG GACGTGACGG TGCACGCCGG CGCGGTCGGG
GGCCCGTCGG CCGGCATGAT GCTGGCGCTG GGCATCTACG ACAAGCTCAC CCCCGGGCCG
CTCACCGGCG GGAAGGACAT CGCCGGGACG GGGACCATCA GCACCGACGG ACGGGTGGGC
CCCATCGACG GCATCCCGCA GAAGATGGAC GGGGCCAAGG AGGCCGGGGC CACCTGGTTC
CTGGCGCCGG ACGACAACTG CGACCAGGTG CTGGGCAACG TCCCCGACGG TATGACGCAC
GTGGCGGTGA CCGACTTCCC CGAGGCGCTG GCCGCCGTGG AGGCGATCGC CGCGGGGGAG
ACCGGCGAGC TCGAGACCTG CGAGGACGTC ACCTCCCAGG GCTGA
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| Protein sequence | MTWAPDSDHG STRGRSRSAG RRLGAVLLLV GALAVVLAVL LSNLITAPYV VFKPGHAYDV
LSEDGPGDAP MISVDGHETH PTEGALRMTT ISMYGGPGHE VSWWDLAGSW LGGEDEILPR
SQVFPEKVTE QEVEQVSTAQ MVGSQSGAAT VALRAAGIEV SEEVVVAQVM PDAPAEGVLE
AEDVILSVDG VKATALEAVQ QAIQEVDPGD EVTVEVERDG STKTLKVPTT EMEGRTVVGV
GLATMAESDV DVTVHAGAVG GPSAGMMLAL GIYDKLTPGP LTGGKDIAGT GTISTDGRVG
PIDGIPQKMD GAKEAGATWF LAPDDNCDQV LGNVPDGMTH VAVTDFPEAL AAVEAIAAGE
TGELETCEDV TSQG
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