Gene Ksed_18990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_18990 
Symbol 
ID8373404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1972293 
End bp1973312 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content76% 
IMG OID644992154 
Productpredicted GTPase 
Protein accessionYP_003149665 
Protein GI256825705 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.131008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA ACCTGGCCAC CTACTCCGAG GCCGACGTGA AGATGCGCCC CAACAAGCGC 
GGCTCGCGCC CCCGCACCAA GCAGCGCCCG GCGCACTCCG ATGCCGCGAC CGGGCAGGTG
CTGGCCGTCG ACCGGGGGCG CTTCGACGTG CTGGTCGATG AGGTGCGCGT GCGGGCCATG
AAGGCCCGCG AACTGGGCCG CAAGGGAATC GTCGTCGGCG ACCAGGTGTC GCTGGTGGGG
GACGTCTCGG GAGACCCGGA CGCGCTCGCC CGGATCGTGC GCCGCGAGGC CCGCGAGACG
CTGCTGCGCC GCACCGCCGA CGACACCGAC CCGGTGGAGC GCGTGCTGGT CGCGAACGTC
TCGCGCATGC TGATCGTGAC CGCCGCGGCC GACCCGGAGC CGCGCCCGCG CCTCATCGAC
CGTTGCCTGG TGGCCGCCTG GGAGGCCGGC ATCGAGCCGG TGCTGGTGAT CACCAAGGCC
GACCTCGCCG ACCCCGCCGA GCTGCTGGCG CAGTACGCGG CGCTGGACGT GCCCACCGTG
GTGGTCGCGC GCGCCGGGGA GGACCCACAC GTGGGGCTCG CCGCGGTGCA CGAGCTGGTG
GCCGACCGGT GGACCGTGCT GGTGGGGCAC TCCGGGGTGG GCAAGTCGAC CCTGGTGAAC
GAGCTGGTGC CCGGTGCGGG GCGCGCCGTG GGCGGGGTGA ACGACACCAC CGGCCGCGGG
CGGCACACGA GCACCTCCGC GGTGGCCCTG GAGCTGCCGG ACGGTGGCTG GGTGGTGGAC
ACCCCCGGCA TCCGGTCGTT CGGGCTGGCG CACGTGGACC CCGAGGCGCT GGTGGGGCTG
TTCCCCGACC TGGCGCCGGG CACCGAGGAG TGCCCCCGAG GGTGCCCCCA CGAGGGCGTG
GACGACTGCG GGCTGGACGG CTGGGTGGCC GCGGGGAATG CCGGCCCCGG CGGGGCACAG
CGACTGGACT CGCTGCGGCG GCTGCTGCGC GCCCGCGGCG GCGAGGACCC CGGGAGTTAG
 
Protein sequence
MARNLATYSE ADVKMRPNKR GSRPRTKQRP AHSDAATGQV LAVDRGRFDV LVDEVRVRAM 
KARELGRKGI VVGDQVSLVG DVSGDPDALA RIVRREARET LLRRTADDTD PVERVLVANV
SRMLIVTAAA DPEPRPRLID RCLVAAWEAG IEPVLVITKA DLADPAELLA QYAALDVPTV
VVARAGEDPH VGLAAVHELV ADRWTVLVGH SGVGKSTLVN ELVPGAGRAV GGVNDTTGRG
RHTSTSAVAL ELPDGGWVVD TPGIRSFGLA HVDPEALVGL FPDLAPGTEE CPRGCPHEGV
DDCGLDGWVA AGNAGPGGAQ RLDSLRRLLR ARGGEDPGS