Gene Ksed_18670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_18670 
Symbol 
ID8373372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1942252 
End bp1943121 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content70% 
IMG OID644992123 
Productpredicted xylanase/chitin deacetylase 
Protein accessionYP_003149634 
Protein GI256825674 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCA CCCTCACGGA GTTGAAGAAG CCTGCGCGGG CCGCAGCCCG CCACCTGGCG 
CTCGACGCCC TGGCCCTGCG TGACCGCATG ACGGGGAGCG TGACGGGGCT GCTGCAGACG
CCGCGTGTCC ACCTCCTGTA CCTGCACGCC GTCCCCGTCC ACGAGGAACC GGCCTTCCGC
GCGCTCCTGG ACCGTCTGGC CAAGGACCAC GAGTTCGTCA CCCACGACGA GGCGGTCCGA
CGCATCCGCA CCGGTGACAT CACGGCACCA GCGGTGAGCT TCAGCTTCGA CGACGCGTTC
GCCAGCAACT ACCGCACGGC CTCGATCCTC GAGGAGTACG GAACGCGCGG GATGTTCTTC
GTTCCTGCCG ACATGCCGGG CACCGGAACG GTGGAGGGCA CGCGCAGGCT GTTCGGCTAC
GAGCAGAATG TGACCGAGCC GGGCATGACA TGGGCGCAGA TCGACGAGCT GCGCGAGCGG
GGTCATGGCA TCGGCAGCCA CACCTGCACG CACGCCAACC TCGCGGAGGT CCCGGTCGCC
GACGCACGCG AGGAGATTCG CCGCGCGCAC GAGGTGCTCA CCGCCCGCTA TGGCGACGTC
CCGCACTTCG CCTGGCCCTT CGGGCGGACC TTCCACATCA CCCCCGAGCT CGTGGAGACC
GTCTTCGAGA CGGGGCACAC CACGTGCAGC TCTGCGGTGC GCGGCTCGCA CTGCGGCGCC
TCCCCCGACG ACGCCGAGCG GCCGCTCGTC CTGCTCCGCG ACCACGTCAT GACGAGCTGG
CCCCTGGAGC ACACCCTGCA CCTGCTGTCC CGCAGCGCCG CCTCGCCCCG CCCCCCGTGG
ACCCAGTACC CCCAGGAGTG GACCCGATGA
 
Protein sequence
MTTTLTELKK PARAAARHLA LDALALRDRM TGSVTGLLQT PRVHLLYLHA VPVHEEPAFR 
ALLDRLAKDH EFVTHDEAVR RIRTGDITAP AVSFSFDDAF ASNYRTASIL EEYGTRGMFF
VPADMPGTGT VEGTRRLFGY EQNVTEPGMT WAQIDELRER GHGIGSHTCT HANLAEVPVA
DAREEIRRAH EVLTARYGDV PHFAWPFGRT FHITPELVET VFETGHTTCS SAVRGSHCGA
SPDDAERPLV LLRDHVMTSW PLEHTLHLLS RSAASPRPPW TQYPQEWTR