Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_18670 |
Symbol | |
ID | 8373372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1942252 |
End bp | 1943121 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644992123 |
Product | predicted xylanase/chitin deacetylase |
Protein accession | YP_003149634 |
Protein GI | 256825674 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCACCA CCCTCACGGA GTTGAAGAAG CCTGCGCGGG CCGCAGCCCG CCACCTGGCG CTCGACGCCC TGGCCCTGCG TGACCGCATG ACGGGGAGCG TGACGGGGCT GCTGCAGACG CCGCGTGTCC ACCTCCTGTA CCTGCACGCC GTCCCCGTCC ACGAGGAACC GGCCTTCCGC GCGCTCCTGG ACCGTCTGGC CAAGGACCAC GAGTTCGTCA CCCACGACGA GGCGGTCCGA CGCATCCGCA CCGGTGACAT CACGGCACCA GCGGTGAGCT TCAGCTTCGA CGACGCGTTC GCCAGCAACT ACCGCACGGC CTCGATCCTC GAGGAGTACG GAACGCGCGG GATGTTCTTC GTTCCTGCCG ACATGCCGGG CACCGGAACG GTGGAGGGCA CGCGCAGGCT GTTCGGCTAC GAGCAGAATG TGACCGAGCC GGGCATGACA TGGGCGCAGA TCGACGAGCT GCGCGAGCGG GGTCATGGCA TCGGCAGCCA CACCTGCACG CACGCCAACC TCGCGGAGGT CCCGGTCGCC GACGCACGCG AGGAGATTCG CCGCGCGCAC GAGGTGCTCA CCGCCCGCTA TGGCGACGTC CCGCACTTCG CCTGGCCCTT CGGGCGGACC TTCCACATCA CCCCCGAGCT CGTGGAGACC GTCTTCGAGA CGGGGCACAC CACGTGCAGC TCTGCGGTGC GCGGCTCGCA CTGCGGCGCC TCCCCCGACG ACGCCGAGCG GCCGCTCGTC CTGCTCCGCG ACCACGTCAT GACGAGCTGG CCCCTGGAGC ACACCCTGCA CCTGCTGTCC CGCAGCGCCG CCTCGCCCCG CCCCCCGTGG ACCCAGTACC CCCAGGAGTG GACCCGATGA
|
Protein sequence | MTTTLTELKK PARAAARHLA LDALALRDRM TGSVTGLLQT PRVHLLYLHA VPVHEEPAFR ALLDRLAKDH EFVTHDEAVR RIRTGDITAP AVSFSFDDAF ASNYRTASIL EEYGTRGMFF VPADMPGTGT VEGTRRLFGY EQNVTEPGMT WAQIDELRER GHGIGSHTCT HANLAEVPVA DAREEIRRAH EVLTARYGDV PHFAWPFGRT FHITPELVET VFETGHTTCS SAVRGSHCGA SPDDAERPLV LLRDHVMTSW PLEHTLHLLS RSAASPRPPW TQYPQEWTR
|
| |