| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_18610 |
|---|
| Symbol | |
|---|
| ID | 8373366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 1936259 |
|---|
| End bp | 1937182 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644992117 |
|---|
| Product | nucleoside-diphosphate-sugar epimerase |
|---|
| Protein accession | YP_003149628 |
|---|
| Protein GI | 256825668 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 0.967608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGTCC TCGTCCTGGG CTCCCGCGGG TTCGTCGGGA CGGCAGTCTG TGCCGCGCTG
CGGGAGCAGG GCCACGATGT GACCACCGCG GTGGCCCCGC GCGTCCAGAC CGACGAGATC
TCCGCGGCTC AGCGCGAGCA GTTCGTGGGC GAGATCCAGG CCGCCCTCGG GGGGTGCGAC
GCCGTCGTGA ACGCCGCGGG TGTGCCCGAT GCCACCGGCA GCGACTACGA CGCGATGGTC
GGGGCCAACA CGGTGCTGCC CGGCATCGTG GCCGAGGCCG CACGACGACT CGGTCTCCGT
TGCGTGCACG TGAGCAGCGC GGCCGTGCAG GGCGACAAGG AGGTGCTCGA CTCCTCCGAT
GACGTGCGCC CCTTCTCCCC TTACTCGGAG TCCAAGGTCC GTGGTGAGCG CGAGGCCCTC
CAGCAGGGCG GTGAGGTGGT CGTGTACCGC CCACCTGGCG TGCACGGCGC CAACCGTGAC
GTCACGCGCA CCGTGGCACG GCTGGCGGGC TCTCCTCTCT CCTCGGTGGC CGGCGACGGC
AGCCATCCGG CGGCGCAGGC GCTCATCGGC AACGTAGGTG CGGCGGTCGC CACCCTGGCG
ACCCACCCGG ACACCCCGCC GCGGGTGGTG CACCATCCGT GGGAGGGCCA GACGACGGCC
TCGCTCCTCC GCGCCCTCGG CGGCCGCGAG CCGGTGCACC TGCCTTCCGC GCTCGCCCGC
GGCCTCGTCG AGGTGGCCCG AGCCGCCGGG CGCGTGCGTC CCGGGCTCGC GGGGCACGCG
CGCCGCCTCG AGGTGCTCTG GTTCGGCCAG TCACAGGCCC CGAGCTGGCT CGATAGCATC
CAATGGGTCG CCCCGGATGG ACGAGAGTCC TGGGAAGCCC TCGGTCGCAG CATTCGCACC
TCGAACAAGG AGACACATGA CTGA
|
|---|
| Protein sequence | MNVLVLGSRG FVGTAVCAAL REQGHDVTTA VAPRVQTDEI SAAQREQFVG EIQAALGGCD
AVVNAAGVPD ATGSDYDAMV GANTVLPGIV AEAARRLGLR CVHVSSAAVQ GDKEVLDSSD
DVRPFSPYSE SKVRGEREAL QQGGEVVVYR PPGVHGANRD VTRTVARLAG SPLSSVAGDG
SHPAAQALIG NVGAAVATLA THPDTPPRVV HHPWEGQTTA SLLRALGGRE PVHLPSALAR
GLVEVARAAG RVRPGLAGHA RRLEVLWFGQ SQAPSWLDSI QWVAPDGRES WEALGRSIRT
SNKETHD
|
|---|
| |