Gene Ksed_18300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_18300 
Symbol 
ID8373335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1902136 
End bp1903413 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content69% 
IMG OID644992087 
Productserine hydroxymethyltransferase 
Protein accessionYP_003149599 
Protein GI256825639 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0624646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA CCCCCTTCTT CGGTCCGGAC TACGCGATGC TGGAGCAGCA GGACCCCGAG 
ATGGCAGGGA TCCTGCTCTC GGAGCTGGAG CGCCAGCGGA CGGGCATCCA GCTCATCGCC
AGCGAGAACC AGACCAGCCC CGCCGTGCTG ACGGCGCTGG GGTCCACGCT CTCCAACAAG
TACGCCGAGG GGTACTCCGG CAAGCGCTAC TACGGCGGCT GTTCCGAGGT CGACAAGGCC
GAGGACCTGG CCATCGCCCG CGCCAAGGAG CTCTTCGCCG CCGACCACGC GAACGTGCAG
CCGCACTCGG GGGCCTCGGC CAACCAGGCC GTCTACGGCG CGTTCGCCAA GCCCGGCGAC
ACCATCCTGG CCATGAGCCT CGACCATGGT GGCCACCTCA CCCACGGGTT CAAGGTGAGC
TTCTCCGGCA AGTGGTTCAA CGCCGTGCAC TACGGCGTGA ACGCCGAGAC CGAGCACATC
GACTACGACG AGGTCGAGCG CCTGGCCAAG GAGCACCGCC CCAAGATCAT CCTGGCGGGC
GGCTCGGCCA TCCCGCGCCT GATCGACTTC GAGCGCTTCC GTGCCATCGC CGACGAGGTC
GGTGCCATCT TCTGGGTGGA CGCCGCGCAC TTCATCGGCC TGGTCGCCGG TGGCGTGATC
CCCTCTCCGG TGCCCCACGC CGACGTGGTC TCGTTCACCA CCCACAAGGT GCTGCGCGGC
CCGCGCGGTG GCGCGATCGT CTGCAAGGCG GAGCACGCCA GCAAGATCGA CAAGGCCGTC
TTCCCGATGA TGCAGGGTGG CCCCCTCATG CACGCCGTCG CCGCCAAGGC GGTCAACTTC
CACGAGTGCA TGCAGCCGGC CTACAAGGAG TACGCCGCCG CGGTGGTGGA GAACTCCAAG
AAGCTGGCCG GCGCGCTGGG GGAGCACGGC CTGCGGCCGA TCTCCGGCGG CACCGACACC
CACCTGTCGC TGCACGACCT GCAGGGGCTG GGCGTCTCCG GCAAGGATGC CGAGGCGCGC
TGTGACGCCG CGGGCCTGGT GCTCAACAAG AACACCATCC CGTTCGACCC GGCGCCCCCG
ATGCTCGCCT CCGGCGTGCG TGTGGGCACG CCGGCCGTCA CCACCCAGGG CATGGGTGTC
GAGCAGATGC AGACCATCGC CGACCTCATC GCCAAGGCCG TCACCCAGGG CGACGGGGAC
CGCGAGGGAG CCGTCTCCCG CGAGATCCGT GCCCAGGTCG ACCAGCTGAC CGCCGAGTTC
CCCGCATACA AGCGCTGA
 
Protein sequence
MSETPFFGPD YAMLEQQDPE MAGILLSELE RQRTGIQLIA SENQTSPAVL TALGSTLSNK 
YAEGYSGKRY YGGCSEVDKA EDLAIARAKE LFAADHANVQ PHSGASANQA VYGAFAKPGD
TILAMSLDHG GHLTHGFKVS FSGKWFNAVH YGVNAETEHI DYDEVERLAK EHRPKIILAG
GSAIPRLIDF ERFRAIADEV GAIFWVDAAH FIGLVAGGVI PSPVPHADVV SFTTHKVLRG
PRGGAIVCKA EHASKIDKAV FPMMQGGPLM HAVAAKAVNF HECMQPAYKE YAAAVVENSK
KLAGALGEHG LRPISGGTDT HLSLHDLQGL GVSGKDAEAR CDAAGLVLNK NTIPFDPAPP
MLASGVRVGT PAVTTQGMGV EQMQTIADLI AKAVTQGDGD REGAVSREIR AQVDQLTAEF
PAYKR