Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_18300 |
Symbol | |
ID | 8373335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 1902136 |
End bp | 1903413 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644992087 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_003149599 |
Protein GI | 256825639 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.0624646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA CCCCCTTCTT CGGTCCGGAC TACGCGATGC TGGAGCAGCA GGACCCCGAG ATGGCAGGGA TCCTGCTCTC GGAGCTGGAG CGCCAGCGGA CGGGCATCCA GCTCATCGCC AGCGAGAACC AGACCAGCCC CGCCGTGCTG ACGGCGCTGG GGTCCACGCT CTCCAACAAG TACGCCGAGG GGTACTCCGG CAAGCGCTAC TACGGCGGCT GTTCCGAGGT CGACAAGGCC GAGGACCTGG CCATCGCCCG CGCCAAGGAG CTCTTCGCCG CCGACCACGC GAACGTGCAG CCGCACTCGG GGGCCTCGGC CAACCAGGCC GTCTACGGCG CGTTCGCCAA GCCCGGCGAC ACCATCCTGG CCATGAGCCT CGACCATGGT GGCCACCTCA CCCACGGGTT CAAGGTGAGC TTCTCCGGCA AGTGGTTCAA CGCCGTGCAC TACGGCGTGA ACGCCGAGAC CGAGCACATC GACTACGACG AGGTCGAGCG CCTGGCCAAG GAGCACCGCC CCAAGATCAT CCTGGCGGGC GGCTCGGCCA TCCCGCGCCT GATCGACTTC GAGCGCTTCC GTGCCATCGC CGACGAGGTC GGTGCCATCT TCTGGGTGGA CGCCGCGCAC TTCATCGGCC TGGTCGCCGG TGGCGTGATC CCCTCTCCGG TGCCCCACGC CGACGTGGTC TCGTTCACCA CCCACAAGGT GCTGCGCGGC CCGCGCGGTG GCGCGATCGT CTGCAAGGCG GAGCACGCCA GCAAGATCGA CAAGGCCGTC TTCCCGATGA TGCAGGGTGG CCCCCTCATG CACGCCGTCG CCGCCAAGGC GGTCAACTTC CACGAGTGCA TGCAGCCGGC CTACAAGGAG TACGCCGCCG CGGTGGTGGA GAACTCCAAG AAGCTGGCCG GCGCGCTGGG GGAGCACGGC CTGCGGCCGA TCTCCGGCGG CACCGACACC CACCTGTCGC TGCACGACCT GCAGGGGCTG GGCGTCTCCG GCAAGGATGC CGAGGCGCGC TGTGACGCCG CGGGCCTGGT GCTCAACAAG AACACCATCC CGTTCGACCC GGCGCCCCCG ATGCTCGCCT CCGGCGTGCG TGTGGGCACG CCGGCCGTCA CCACCCAGGG CATGGGTGTC GAGCAGATGC AGACCATCGC CGACCTCATC GCCAAGGCCG TCACCCAGGG CGACGGGGAC CGCGAGGGAG CCGTCTCCCG CGAGATCCGT GCCCAGGTCG ACCAGCTGAC CGCCGAGTTC CCCGCATACA AGCGCTGA
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Protein sequence | MSETPFFGPD YAMLEQQDPE MAGILLSELE RQRTGIQLIA SENQTSPAVL TALGSTLSNK YAEGYSGKRY YGGCSEVDKA EDLAIARAKE LFAADHANVQ PHSGASANQA VYGAFAKPGD TILAMSLDHG GHLTHGFKVS FSGKWFNAVH YGVNAETEHI DYDEVERLAK EHRPKIILAG GSAIPRLIDF ERFRAIADEV GAIFWVDAAH FIGLVAGGVI PSPVPHADVV SFTTHKVLRG PRGGAIVCKA EHASKIDKAV FPMMQGGPLM HAVAAKAVNF HECMQPAYKE YAAAVVENSK KLAGALGEHG LRPISGGTDT HLSLHDLQGL GVSGKDAEAR CDAAGLVLNK NTIPFDPAPP MLASGVRVGT PAVTTQGMGV EQMQTIADLI AKAVTQGDGD REGAVSREIR AQVDQLTAEF PAYKR
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