| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_17730 |
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| Symbol | |
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| ID | 8373278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 1845735 |
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| End bp | 1850717 |
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| Gene Length | 4983 bp |
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| Protein Length | 1660 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644992038 |
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| Product | ATP dependent helicase, Lhr family |
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| Protein accession | YP_003149550 |
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| Protein GI | 256825590 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.5543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.230312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATG ACGTGCTGCA GCGGTTCTCC CCTCCCACCC GCGCGTGGTT CGAGGCGAAC
TTCGCTGCGC CCACCGCCGC GCAGGCCGGG GCGTGGGACG CGATCAGCCG CGGGGAGAAC
ACGGTCGTGG TGGCCCCGAC CGGCTCGGGC AAGACGCTCT CGGCCTTCCT GTGGTCCCTC
GACCGGTTCG TCCCGCACGG CGACCAGCAG CGCCCCGAGG CGCCGTGCAG CGTCATCTAC
GTCTCGCCGC TGAAGGCCCT GGCGGTGGAC GTGGAGCGCA ACCTCTCGGC GCCCCTGTCC
GGCATCGGAC ACGCGGCCAC CCGACTGGGG GGCGAGGCGC CGCAGGTGAG TGTCTCGTTG
CGCTCTGGGG ACACCCCGGC GGCCGAGCGT CGCCGGTTCG CCAGCGGCGG GGCCGACGTC
CTGATCACCA CCCCGGAGTC GTTGTACCTG CTGCTCACCT CACGGGCCCG GGAGCAGCTG
ACCGGGGTGA CCACCGTGAT CGTCGACGAG GTCCACGCGC TGGCCGGCAC GAAGCGGGGC
GCCCACCTCG CGCTCTCCCT GGAGCGCCTG GACGCGATGC TGGAGCGGCC CGCGCAGCGG
ATCGGGCTCT CGGCGACGGT CCGCCCGGTG GACGAGGTGG GGCGCTGGTT GACGGGCGGG
CGCCCGGTGA CGATCGTCCA GCCACCGGCC GAGAAGGCGT GGGAGCTGTC CGTCCACGCC
GACGTGCCGG ACATGGCCGA CCTGAGCACC GCGCCCCAGG TCTCGCCCGC CCAGCCCGAT
GCGGGGAGCG TGCCGGGCGG GGCGGGTGCG GCGGCCTCGG CGGGCGACAG CGCGCCGGGA
GCGCCCGGCG TGCCAGGCAC CTCGGACGTC GAGTCCGAGC TCTCCCTTCC GGAGCACCTC
ACGCTGGCGG ACCTCTCCCC GGAGGTGGCG GGGGCCGATC CCCGCGACCG GGCGAGCATC
TGGCCCCACG TGGAGCACCG CATCGTCGAG GAGATCGCAC GCCACACCTC GACCCTGGTG
TTCTGCAACT CGCGCCGGTC GGCCGAGCGG CTGACGGCGC GGCTCAACGA GATCTGGGCC
GAGCGGGTGG CCCTGGCCGA CACCGACGCG GGCAGCGCAG CCGAAGCCGA CGAGGGTGCG
GGCGGCGGCG ACACCGACCG CGGCAGCGCA GGACGAGTCA CCGCATCGAG CCCCCGATCG
CCCGCCGAGA TGATGGCGCA GGCCGGCGCC TCGGCCGGGG CACCCGCGGT GCTGGCGCGG
GCGCATCATG GGTCGGTGAG CAAGGAGCAC CGGGCCGAGA TCGAGGACGC GCTGAAGGCC
GGCACGCTCC CGGCCGTGGT GGCGACGAGC TCGCTGGAGC TCGGCATCGA CATGGGCGCG
GTGGACCTGG TGGTCCAGGT GGAGTCCCCG CCCAGCGTGG CCAGCGGCCT GCAGCGGGTC
GGGCGCGCCG GCCACCAGGT GGGGGCGGTC AGCCGCGGCA GCTTCCACGC CCTGCACCGA
CAGGACCTGC TGGAGACCGC GGTGGTGGTC GAGCAGATGC GCAGCGGCGG CATCGAGGCG
CTGCGGATCC CCGCGAACCC GCTGGACGTG CTCGCCCAGC AGGTGGTCGC AGCGTGTGCC
ATGGACGACT GGTCGGTCGG GGAGCTGCAC ACGATGGTGC GGCGCGCGGC CCCGTGGTCG
GATCTCTCGC GCGCGGTGCT GGAGTCCGTC CTGGAGATGC TCACCGGCCG CTACCCCTCG
GAGGACTTCG CCGACCTGCG GCCCCGGCTG GTCTGGGACC GCGTGGACGA CCTGCTGACC
GCCCGCCCCG GGGCGCAGCG CCTGGCCATC CTGTCCGGCG GCACCATCCC CGACCGCGGG
CTCTTCGGTG TCTTCCTCGC CGGCGGGGGC GGACCGGGCC GGCGGGTCGG TGAGCTGGAC
GAGGAGATGG TCTACGAGTC CCGGGTGGGC GACGTCTTCA CCCTCGGCAC CTCGTCGTGG
CGCATCGAGG ACATCACGCA CGACCAGGTG CTGGTCTCCC CCGCGCCCGG CCAGCCGGGA
AAGCTCCCCT TCTGGCACGG CGACGGGCTG GGACGGCCGG CGGAGCTGGG CGGCCACCTG
GGTGCCTTCG TGCGCGAGCT CGCCACCGGC GACGAGGCGA CCCTGAGGGC CCGGCTGACC
GACGGCGGTC TGGACGAGTG GGCCGTGGAC AACGTGCTGG CCCACGTGGC CGCGCAGGCC
GAGGCCACCA CCGCGGTGCC GGACGACCGC ACCGTGGTGG TGGAGCGCTT CCGCGACGAG
CTGGGCGACT GGCGGGTGGT CATCCACTCC CCCTGGGGCT CCCCCGTCCA CGCCCCGTGG
GCGCTGGTGC TGGCCGAGCG GCTGCGCCAG CGCTTCGGGG TGGACGTGCA GGCCCTGCAC
GCCGACGACG GCATCGTGCT GCGCCTGCCG GACCTCGGGG GGTGGGACGC GTGGGCCGTG
CCCGATGCGG TGGCCCCCGC CGGCGCGCCG GGTGGCGGTG CTGGTGGACC CGTCGGCGCG
CCGGGTGACG GGGCCGACGC TGCGGCCAGC GGCACCGTGG CCCTGGACGC CCGCTCGCTG
GACGTCGCCC TCGGGGAGCT CGTGGCCCTG GACCCGGAGG AGGTCCACGA CGAGGTGACC
GCCCTCATCG GCGGCTCCGC GCTCTTCGCC TCCCGCTTCC GCGAGTGCGC GGCGCGGGCA
CTGCTGCTCC CCCGGCGCCG GCCCGACCGG CGGCAGGCCC TGTGGCAGCA GCGCCAGCGG
GCTGCGTCGC TGCTCGAGGT GGCGGCGGGG CACCCGGAGT TCCCGATCGT CCTGGAGGCC
GTCCGCGAGG TGGTTCAGGA CGTCTACGAC GTGCCTGCCC TGACGGCGCT GATGCGGCGT
CTCGCCGGGC GCGAGGTGCG GCTGAGCTTC GTGGAGACCC CCACCGCCAG CCCCTTCGCG
CAGAACCTGA TGTTCGGCTA CGTGGCGCAG TTCCTCTACG AGGGCGACTC CCCGCTGGCC
GAGCGGCGAG CCGCGGCCCT GGCGCTGGAC CCCACGCTGC TCGCCGACCT GCTGGGGCGG
TCCGACGGCA CGCAGCTGCG GGACCTGCTG GACCCGCAGG CCGTGGCCGA CACCGAGGCC
GAGCTGCAGC ACACCGCCGT CGACCGCCGG GCCCGCCACG CGGAGGACCT GGCGGACCTG
CTGCGCGTGC TGGGTCCGCT CGATGACGCG GAGCTCGCCG CCCGCAGCGT GCCCGAGGGC
GACCCGGCCG CCTGGACGGC CGAGCTGGAG GGCGCGCGCC GCATCGTGCG GGTGCCGGTG
GGCGGGCGGG ACTGCTGGGC GGTGGTGGAG GACGTGGCCC GGCTGCGGGA CGCGCTGGGG
GTGCCGGTGC CGCCGGGCAT CCCCCAGGCC GCCATGGTGG TGAGCACCGA CCCGCTGACC
GACCTGCTGG TGCGCCACGC CCGCACCCAC GGGCCCTTCC GCGCCGAGGC ACTGGCCGAG
CGGTACGGGC TGGGGCGGGC CGTCGTGGTG GCGGCGCTGC GCGAGCTGGT GCGCTCCGGA
CGCGTGGGCG AGGGGGCTCT GCTGCCGACG GCCCTGGGCG GCCGGGACAC CGACGACGGG
GTGGGCCCGG ACTTCTGCGA CGCCGACGTG CTGCGCCGGC TGCGGCGCCG CTCCCTGGCC
GCGTTGCGCG CCGAGGTCGA GCCGGTGGAC GGCGACGACT TCGCGCGCTT CGTGCTGCGC
TGGCAGGGCC TGGAGGACCC CGGCCGCGGG GTGGATGCGG TGGCCCGCGC CCTGGAGCAG
CTCACGGGCG CGGTGCTGCC CGCCAGTGCG GTGGAGAGCG TGGTGCTGCC GGCCCGGGTG
CGGGACTACG CGCCGGGGAT GCTGGACGAG CTGTTGGCCA CCGGCGAGTT CCTGTGGGTC
TCGCACGGGC TGCTGGCCGG GGACGACCTG TGGGTCTCCT TCCACCCGGC CGACCAGGCG
GAGGCCACGC TGCCGCTCGC GCAGGAGGAC CCGGACCGCG CGTCTGGGCT GGTGCGCGAG
CTTCTCACCA CGCGCGGCGC GATGCGGTGG GCGGACCTGC GCACAGCGCA CCAGGGCGCC
CGTGCGGACG ATGCGGACCC GGTGCACCTG AGCACCGACA CCCAGTGGAC CGATGCCGTG
TGGGACCTGG TCGGGCAGGG TCGGGCCACC TGCGACACCT TTGCACCGGT TCGCGCCCGC
CTGGCCGGGG GCCGGACCAC GCAGAAGACC CGTCCCCGGG CCCGGCGGGC GCGGTTGTCG
GGGCGCCCCG CATCGTTGCA GGGGCTGAGC GGCGCGGCGG TGCGCCGGGA CCGCCCGGTC
TCCACGCCGG ACGTGCTGGC CGGCCGCTGG TCGGTGCTGC CCGAGCGGGA CGATGACCCC
ACGGTGCGGG CCGTCGCCGC CGCGGAGGTG GCCCTCGACC GTCACGGGGT GGTGACGCGG
GGCGCCGTGG CCGCGGAGGA GGTGGCCGGC GGCTTCAGCG CGCTGTACAA GGTGCTGGCG
GCCGCGGAGG ACGCCGGACG GGTGCGGCGG GGCTACTTCG TCGACGGTCT GGGCGCCGCC
CAGTTCGCGA CCGCGGGAGC CGTCGACCTG CTGCGGGGCG AGCAGCCCCG GGTGCAGGCG
CGCCTGCTCA GTGCCTGCGA CCCCGCCGTC GTCCACGGGG CGGCCCTGCC CTGGCCCGAG
ACCACCGGCG GCGGCCACCG TCCGTCACGG AAGGCCGGTG CGCTGGTGGC CCTCGTGGAG
GGCGTGCCGG CCGTGTGGTG GGAGCGCGGT GGCCGCACGG CGCTGACCTT CACCCTCGAC
CCCGAGGCGC TCGCGCAGGC CGCCGAGGTG GCGGCGCGGG CGGTGCGGGA GCGCCGCATC
GCGGGCCTGT CGGTGGAGAC CATCGACGGG GAGGCGGCCC TGCGCACCGA GTCACCGCTG
GTGGCCGCGC TCGAGGCCGC GGGCTTCGGG GCGACGCCGA AGGGGTGGAG GCTCCGTGCC
TGA
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| Protein sequence | MSDDVLQRFS PPTRAWFEAN FAAPTAAQAG AWDAISRGEN TVVVAPTGSG KTLSAFLWSL
DRFVPHGDQQ RPEAPCSVIY VSPLKALAVD VERNLSAPLS GIGHAATRLG GEAPQVSVSL
RSGDTPAAER RRFASGGADV LITTPESLYL LLTSRAREQL TGVTTVIVDE VHALAGTKRG
AHLALSLERL DAMLERPAQR IGLSATVRPV DEVGRWLTGG RPVTIVQPPA EKAWELSVHA
DVPDMADLST APQVSPAQPD AGSVPGGAGA AASAGDSAPG APGVPGTSDV ESELSLPEHL
TLADLSPEVA GADPRDRASI WPHVEHRIVE EIARHTSTLV FCNSRRSAER LTARLNEIWA
ERVALADTDA GSAAEADEGA GGGDTDRGSA GRVTASSPRS PAEMMAQAGA SAGAPAVLAR
AHHGSVSKEH RAEIEDALKA GTLPAVVATS SLELGIDMGA VDLVVQVESP PSVASGLQRV
GRAGHQVGAV SRGSFHALHR QDLLETAVVV EQMRSGGIEA LRIPANPLDV LAQQVVAACA
MDDWSVGELH TMVRRAAPWS DLSRAVLESV LEMLTGRYPS EDFADLRPRL VWDRVDDLLT
ARPGAQRLAI LSGGTIPDRG LFGVFLAGGG GPGRRVGELD EEMVYESRVG DVFTLGTSSW
RIEDITHDQV LVSPAPGQPG KLPFWHGDGL GRPAELGGHL GAFVRELATG DEATLRARLT
DGGLDEWAVD NVLAHVAAQA EATTAVPDDR TVVVERFRDE LGDWRVVIHS PWGSPVHAPW
ALVLAERLRQ RFGVDVQALH ADDGIVLRLP DLGGWDAWAV PDAVAPAGAP GGGAGGPVGA
PGDGADAAAS GTVALDARSL DVALGELVAL DPEEVHDEVT ALIGGSALFA SRFRECAARA
LLLPRRRPDR RQALWQQRQR AASLLEVAAG HPEFPIVLEA VREVVQDVYD VPALTALMRR
LAGREVRLSF VETPTASPFA QNLMFGYVAQ FLYEGDSPLA ERRAAALALD PTLLADLLGR
SDGTQLRDLL DPQAVADTEA ELQHTAVDRR ARHAEDLADL LRVLGPLDDA ELAARSVPEG
DPAAWTAELE GARRIVRVPV GGRDCWAVVE DVARLRDALG VPVPPGIPQA AMVVSTDPLT
DLLVRHARTH GPFRAEALAE RYGLGRAVVV AALRELVRSG RVGEGALLPT ALGGRDTDDG
VGPDFCDADV LRRLRRRSLA ALRAEVEPVD GDDFARFVLR WQGLEDPGRG VDAVARALEQ
LTGAVLPASA VESVVLPARV RDYAPGMLDE LLATGEFLWV SHGLLAGDDL WVSFHPADQA
EATLPLAQED PDRASGLVRE LLTTRGAMRW ADLRTAHQGA RADDADPVHL STDTQWTDAV
WDLVGQGRAT CDTFAPVRAR LAGGRTTQKT RPRARRARLS GRPASLQGLS GAAVRRDRPV
STPDVLAGRW SVLPERDDDP TVRAVAAAEV ALDRHGVVTR GAVAAEEVAG GFSALYKVLA
AAEDAGRVRR GYFVDGLGAA QFATAGAVDL LRGEQPRVQA RLLSACDPAV VHGAALPWPE
TTGGGHRPSR KAGALVALVE GVPAVWWERG GRTALTFTLD PEALAQAAEV AARAVRERRI
AGLSVETIDG EAALRTESPL VAALEAAGFG ATPKGWRLRA
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