Gene Ksed_17480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17480 
Symbol 
ID8373253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1817390 
End bp1818226 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content70% 
IMG OID644992013 
Producthypothetical protein 
Protein accessionYP_003149525 
Protein GI256825565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.000911252 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.188624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACCT CAGGCGTCCA GCCGGTCGAG GGCGACCGCT CGCCCGTGCG GGAGGTGCGC 
GGCCGCATCG AGAGCCGGGC GGTCCACATC GACCTGCGTG GTGCGGTGAT GTTGGCTTTC
GTTGCCGTGG TCGGCCTGCT CGCCTTCACC TGGCCGCTGC TGGTCACGCC CGACTCGTCC
CTGGCGGGGT CCACCCAGGC GCCGCTGGTG TTCGCGCTGA TCCTGCCGGT GGTCATCGGA
CTGGCCCTGA GCGAGCTGAC CGGTGAGGGC ATGGACGTCA AGGCGTTGGC GATGTTGGGG
GTGCTGTCCG CGGTGGGTGC GGTGCTGCGC CCCCTGGGTG CCGGGACGGC CGGCATCGAG
ACGGTCTTCT TCCTGCTGGT GCTGGGCGGG CGCGTGTTCG GGCCGGGATT CGGCTTCATT
CTGGGCAACA CCACGCTGTT CGCCTCGGCG CTGCTGACCG CCGGAGTGGG GCCGTGGCTG
CCCTTCCAGA TGATCAGCTC CGGCTTCGTC GGGCTGGGGG CGGGCTTGCT GCCGCGCTGC
CGTGGCTGGC TGGAGATCGG GCTGCTGGCG CTCTACGGCA TCGTGTCGGC GTTCATGTTC
GGCATGTTGA TGGACCTGTC CTTCTGGCCC TTCAACCTGG GCACGGGAAC CGACGCGTCC
TACTCCCCCG ACCTGAGCGC CTGGGAGAAC CTGCAGCGCT TCTGGGTGTT CAACCTGGCC
ACCGCGATGG GGTGGAACAC CGGCCGGGCG ATCACGAACA CGGTGTTCAT CGTGCTGGTG
GGCCCGGCCG TTCTGACGGT GCTGCGCCGC GCCGCTAGGC GCGCCCAGTT CGTCTGA
 
Protein sequence
MSTSGVQPVE GDRSPVREVR GRIESRAVHI DLRGAVMLAF VAVVGLLAFT WPLLVTPDSS 
LAGSTQAPLV FALILPVVIG LALSELTGEG MDVKALAMLG VLSAVGAVLR PLGAGTAGIE
TVFFLLVLGG RVFGPGFGFI LGNTTLFASA LLTAGVGPWL PFQMISSGFV GLGAGLLPRC
RGWLEIGLLA LYGIVSAFMF GMLMDLSFWP FNLGTGTDAS YSPDLSAWEN LQRFWVFNLA
TAMGWNTGRA ITNTVFIVLV GPAVLTVLRR AARRAQFV