Gene Ksed_17390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17390 
Symbol 
ID8373244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1803321 
End bp1804274 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content73% 
IMG OID644992004 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_003149516 
Protein GI256825556 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0161852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGC TGCCCCCGCT GGTGCTGATC AAGGGCCCCG AGGACCTGTT GATCGACCGT 
GCCGTCGAGC AGGTGGTGGA GTCGGCGCGG GCCGTGGACC CGGAGGTCGA CGTGGTGCGC
GTGCAGGCGG AGGCCCATAC CCCGGGGGAC GTGGCGATGG CGCTGAGTCC CAGCCTGTTC
GGGGGCGGGA CGGTGGTGGT GGTGCGGAAC TTCGAGGTGG CCGGCGAGCA GCTCGGCGAC
GAGGTGGCCG CGGCGGTGGC CGACCCCGGC GAGGGGAACG TGCTGGTGGT CTCGCACCGG
TCGGGCACCA AGCACAAGCG GGTGCTGGAC GCGATGGCGC GGGCGCACGC GCACACCATC
GAGGCGCCGG CGCTGAAGCG GGACGGGGAC AAGGCGAACT TCGTGCAGAA GGAGTTCCGG
GTGGCGCGGC GCCGCATCGA CAGCGATGCC GTCGAGGTGC TGGTGGCCGC GGCCGGAGGG
GACGCGCGCA CCCTGGCGGC GGCGTGTGCC CAGCTGATCG CGGACACCGA GGGGACGGTC
ACCACCGAGG AGGTGAACCT CTACCACGGG GGCAAGGTGG AGACGACGGG CTTCAAGGTG
GCCGAGGCGG CCTTCACCGG GCAGCGGGCC GAGGCCCTGC GGCTGGTGCG GCACGCGATG
ATCGGCGGGC TGGACCCGGT GCCGATCGTG GCGGTGATGG CCGGGCAGGC GCGGCAGATC
GGGTTGGTGG CCTCGGCGGG GAACCGCGGG TCGGCGCAGG TTGCCAAGGA GCTGGGCATG
GCGCCGTTCA TGGTGGACAA GGCACGGCGG ATGATGAGGG GCTGGGACGG GGAGCGGCTC
GGCGCGGCGG TGACGGCCCT GGCGCGGTGT GACCACGAGG TGAAGGGTGC GGCGCGGGAC
CCGCACTCGG CGGTGGAGCG GGTGGTGGAC GAGATCTGCC GGCTGCACGG TTGA
 
Protein sequence
MAALPPLVLI KGPEDLLIDR AVEQVVESAR AVDPEVDVVR VQAEAHTPGD VAMALSPSLF 
GGGTVVVVRN FEVAGEQLGD EVAAAVADPG EGNVLVVSHR SGTKHKRVLD AMARAHAHTI
EAPALKRDGD KANFVQKEFR VARRRIDSDA VEVLVAAAGG DARTLAAACA QLIADTEGTV
TTEEVNLYHG GKVETTGFKV AEAAFTGQRA EALRLVRHAM IGGLDPVPIV AVMAGQARQI
GLVASAGNRG SAQVAKELGM APFMVDKARR MMRGWDGERL GAAVTALARC DHEVKGAARD
PHSAVERVVD EICRLHG