Gene Ksed_17240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17240 
Symbol 
ID8373229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1785544 
End bp1786521 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content75% 
IMG OID644991990 
ProductNAD-dependent protein deacetylase, SIR2 family 
Protein accessionYP_003149502 
Protein GI256825542 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0983545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCTG AGGGGGTGCC GGGCGCCGGT GGGTCGGGCG ACCAGGGCGT CCCCGAGCTG 
GCGCCGGTCG TGACGCTCCC GCCCCCGGTG GAGGCCGCGC CGCAGGAGGT CGAGGCGCTC
GCCCGCCTGC TGGAGCGCCA CCGCCTGGCC GTGGTGACCG GGGCGGGCAT GTCCACCGCA
TCGGGGATCC CGGACTACCG CGGGCCCGAT GGGGTGCGCC GCGTCCAGCC GATGACGATC
GGCGACTTCC GCGCCGGCCC CGAGTCGCGA CGCCGGTACT GGGCGCGGGC CTTCGTGGGC
TGGGAGCGGT TCACCGGGGC GCAGCCGAAC GCGGGGCACC GCCTCCTGGC GGCGCTGCAG
ACCGAGGGCG TGGTCTCCGG TGCCGTGGCA GGCATCACCG GGGTGATCAC GCAGAACGTC
GACGGGCTGC ACCAGCGGGC CGGGTCCCCG GACGTGCTCG AGCTGCACGG GACGCTCTCG
GCCATCGTCT GCCTGGTCTG TGGGGCGGCC GAGTCGCGCG AGAGCATCCA GGCGCGGTTG
GCCGCGGCGA ACCCGCACCA CCGCGACATC GTGCTGGGCG GGGCGCAGGT GCGGCCCGAC
GGTGACGTCG CACTGGACGA GGAGACCGTG GCCGCGTTCC GCACGGTGGA GTGCTTGGTC
TGCGGCTCGG ACGAGCTGAA GCCGGACGTC GTCTACTTCG GGGAGAACGT CCCCAAGCCG
CGCGTCGCCG ACGCCTACGC GATGGTGGAC GCCGCCGACG GCCTGCTGGT GCTCGGCTCG
AGCCTGAAGG TGATGAGCGG CTACCGCTTC GCGCGGCACG TGCACCGCGC CGGCGGGCCG
GTCGCGGTGG TCACCCGGGG GTGGCACCGC GCCGACCGCG AGGCGAGCCT CACGATCGAC
GCGATGGTGG ACACGACCCT GGCGGCCGTG GCCGACGTGC TCGGCGTGGG GATCAGACCC
GACGCAGCAC CGCGGTGA
 
Protein sequence
MSAEGVPGAG GSGDQGVPEL APVVTLPPPV EAAPQEVEAL ARLLERHRLA VVTGAGMSTA 
SGIPDYRGPD GVRRVQPMTI GDFRAGPESR RRYWARAFVG WERFTGAQPN AGHRLLAALQ
TEGVVSGAVA GITGVITQNV DGLHQRAGSP DVLELHGTLS AIVCLVCGAA ESRESIQARL
AAANPHHRDI VLGGAQVRPD GDVALDEETV AAFRTVECLV CGSDELKPDV VYFGENVPKP
RVADAYAMVD AADGLLVLGS SLKVMSGYRF ARHVHRAGGP VAVVTRGWHR ADREASLTID
AMVDTTLAAV ADVLGVGIRP DAAPR