Gene Ksed_17180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17180 
Symbol 
ID8373223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1780744 
End bp1781244 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content71% 
IMG OID644991984 
Producttranscriptional regulator NrdR 
Protein accessionYP_003149496 
Protein GI256825536 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.966193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACTGTC CATTCTGCCG CCACGAGGAC ACCAAGGTGG TGGACTCGCG CGTCCAGGAC 
GAGGGCACGC TGATCCGTCG GCGGCGCCAG TGCGCGGCCT GCGAGCGCCG CTTCGGCACC
ATCGAGTCGG CGACCCTCAG CGTGGTCAAG CGCTCCGGGG CCAGCGAGCC CTTCCGGCGC
GACAAGGTGA TGTCCGGGGT GCGCAAGGCG TGCCAGGGAC GGCCCGTCAC CGACGACCAG
CTGATGCTGC TGGCCCAGCA GGTGGAGGAG AACATCCGCG CCTGTGGCCA CGCAGAGATC
GACGCCCACG AGATCGGCAT GGCGGTCCTG CCCGTCCTGC GCGAGCTCGA CCTCGTGGCC
TACCTGCGGT TCGCCTCGGT GTACCGCAAC TTCGACTCGC TGGCGGACTT CGAGGACGCC
ATCGCCGAGC TGCGCCAGGA CGCCACCCGT GAGGGCCCGG CACCGGGCGC CACGGAGCCC
GAGGTTGTCG GCGCTCGCTG A
 
Protein sequence
MHCPFCRHED TKVVDSRVQD EGTLIRRRRQ CAACERRFGT IESATLSVVK RSGASEPFRR 
DKVMSGVRKA CQGRPVTDDQ LMLLAQQVEE NIRACGHAEI DAHEIGMAVL PVLRELDLVA
YLRFASVYRN FDSLADFEDA IAELRQDATR EGPAPGATEP EVVGAR