Gene Ksed_16980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16980 
Symbol 
ID8373204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1758284 
End bp1759126 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content71% 
IMG OID644991966 
ProductABC-type metal ion transport system, periplasmic component/surface antigen 
Protein accessionYP_003149478 
Protein GI256825518 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0692706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGT CCACCCGTTC CCGCTGGACC CCCGCCCGCA CCGCGGCCGT CGCCGCCCTC 
GCCCTGAGCC CGCTGGCCCT GAGTGCCTGC GGCGGGGACG CCGCCGCCGA GGGCGACGGC
GAGGTACTGC GCGTCGCAGC CACCCCCACC CCCCACTCGG ACATCCTGCG CTGGGTGGAC
GAGGAGGGCC TGGACGCCGA GCACGGCTTC GAGCTCGAGG TGGTGGAGTT CACCGACTAC
CTGCAGCCCA ACGTGGCCCT GCAGGAGGGC TCGGTGGACG CGAACTACTA CCAGCACAAG
GTGTTCCTGG CCAGCCAGGA GGAGTCCGCC GGCTACGACT TCGAGATCGT CTCGCCCATC
TCCAACCAGC CGATGGGGCT GTACTCCGAG GAGTTCGACT CCCTGGAGGA GCTCCCCGAG
GGCGCCCGCG TGGCCGTGCC GAACGACCCC GCCAACGGCG CCCGCGGCCT GTGGCTGCTG
GAGGAGGAGG GGCTCATCAC GCTGGCCGAC ACCGGCGACA CCCCGCCCAC CCCGGAGGAC
ATCCAGGACA ACCCCAAGGG TCTGGAGTTC GTGCCGGTCG AGGCCGCCCA GACGCCGCGC
TCGGTGGGCG ACGCCGACCT GTCGGCCGTG CCCGGCAACT ACGCCGTCCA GAACCAGCTG
AAGGTGGACG ACGCCCTGGC CGCGGAGGAC CCCCGCGACG AGCGATTCGT CATCAACCTC
GTGACGACCG CCGACCAGGC CGAGGACGAG CGGATCACCG CCCTGGCCGA GGTCCTGAAG
GGCGACGAGG TCGGCACCTA CATCCAGGAC ACCTGGCAGG GCACGGTCGT GCAGATCGAC
TGA
 
Protein sequence
MTPSTRSRWT PARTAAVAAL ALSPLALSAC GGDAAAEGDG EVLRVAATPT PHSDILRWVD 
EEGLDAEHGF ELEVVEFTDY LQPNVALQEG SVDANYYQHK VFLASQEESA GYDFEIVSPI
SNQPMGLYSE EFDSLEELPE GARVAVPNDP ANGARGLWLL EEEGLITLAD TGDTPPTPED
IQDNPKGLEF VPVEAAQTPR SVGDADLSAV PGNYAVQNQL KVDDALAAED PRDERFVINL
VTTADQAEDE RITALAEVLK GDEVGTYIQD TWQGTVVQID