Gene Ksed_16970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16970 
Symbol 
ID8373203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1757329 
End bp1758207 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content71% 
IMG OID644991965 
ProductABC-type metal ion transport system, periplasmic component/surface antigen 
Protein accessionYP_003149477 
Protein GI256825517 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0646398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCT CGCCCCGCTC GCCCCGCTCG CCCCGCCTCT CCACGACGGG TCCCACCCGC 
CGCGCCGCGC TGGCGCTGAC CGCCGCGCTC ACCGCATCGA TCACCCTCGC CGCCTGCGGG
GAGGAGGACA CCGCCGCGGG CGGGGGCGAC TCCGGGGAGG CGAAGGTCCT GAAGGTGGGT
GTGAACCCCG TGCCCCACGG CGAGATCCTC ACCTTCGTCA AGGACGAGCT CGCCGCCGAC
GCCGGTTTGG AGATCGAGGT CGTCGAGTTC ACCGACTACG TCCAGCCCAA CCAGGCGCTC
GACGCCGGGG ACCTGGACGC GAACTACTTC CAGCACGAGC CCTACCTGGC CGAGCAGGAG
GCCAGCGGCG GCTTCGACTT CGAGAGCATC GGCGCCGTCC ACCTGGAGCC GCTGGGCGTG
TACTCCGAGA AGGTGGAGGA CCTCTCGGAG CTCGGCGGTG GCAACAAGGT CGCCATCCCC
AACGACCCCT CCAACGCCGG GCGCGCCCTG AAGCTGCTGG CAGCCCACGG CGTGCTGGAG
CTCGCGGACA CCGGCGACTC CGCCCCCACG CCCGCCGACG TGGCCGACGG CGGTCCTCAG
ATCGTGGAGC TGGAGGCCGC GCAGCTGCCG CGCTCCCTGG GGGACGTGGA CGCCGCGGTG
ATCAACGGTA ACTACGCCAT CGAGGCCGAC CTCTCGCCCA CGCAGGACTC CCTGGCCCTG
GAGGAGTCCG AGGGCAACCC GTACGCCAAC CTGCTGGTGA CGCGCACCGA GGACGCCCAG
GACGAGGACC TCCAGAAGCT CGCGGAGCTG CTGCGCAGCG AGGAGGTCAC GTCCTACATC
GGCGAGAACT ACGAGGGCAC CGTCATCCCC GCCGAGTGA
 
Protein sequence
MSRSPRSPRS PRLSTTGPTR RAALALTAAL TASITLAACG EEDTAAGGGD SGEAKVLKVG 
VNPVPHGEIL TFVKDELAAD AGLEIEVVEF TDYVQPNQAL DAGDLDANYF QHEPYLAEQE
ASGGFDFESI GAVHLEPLGV YSEKVEDLSE LGGGNKVAIP NDPSNAGRAL KLLAAHGVLE
LADTGDSAPT PADVADGGPQ IVELEAAQLP RSLGDVDAAV INGNYAIEAD LSPTQDSLAL
EESEGNPYAN LLVTRTEDAQ DEDLQKLAEL LRSEEVTSYI GENYEGTVIP AE