Gene Ksed_16700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16700 
Symbol 
ID8373176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1726210 
End bp1726620 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content69% 
IMG OID644991938 
Productuniversal stress protein UspA-like protein 
Protein accessionYP_003149450 
Protein GI256825490 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.944045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0341272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA TCGTTGGATA CATCGCGTCG GACGAGGGCC GCGCCGCTCT GAAGTTCGGC 
GTCGCCGAGG CGATCCGTCG TCAGGAGCCG TTGCAGGTCG TCCACTCCGC ACGCACGGGC
AAGGGGTCGG GGGCGGACTC CACCCGGGCC TTCGTGCGCG AGCTGGAGGC TGCCGAGAAG
GACTTGGAGG AGGCCGGTGT CGCGCTGGAG CGACTGGACT TCGACCGCGG CAACGAGCCC
TCGGAGGACC TCATCGAGGT GGCGGAGTCG GCCGCGTCCA GCGGTCAGGA GGCCGTGATC
GTCATCGGCC TGCGGCGTCG CACCCCGGTG GGCAAGCTGC TCTTGGGCTC AAACGCCCAA
AGGATCCTGC TCGAGGCGCC GTGCCCGGTC ATCGCGGTCA AGGCGGTCTG A
 
Protein sequence
MAVIVGYIAS DEGRAALKFG VAEAIRRQEP LQVVHSARTG KGSGADSTRA FVRELEAAEK 
DLEEAGVALE RLDFDRGNEP SEDLIEVAES AASSGQEAVI VIGLRRRTPV GKLLLGSNAQ
RILLEAPCPV IAVKAV