| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_16460 |
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| Symbol | |
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| ID | 8373152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 1698051 |
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| End bp | 1698980 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644991914 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_003149426 |
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| Protein GI | 256825466 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.448971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0163428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CACGGACGGT CGTCGTCCCC GACGGCCTCG AGGGCGAGCG GGTCGATGCG
GGGCTCTCTC GGCTGCTGGG CCTCTCCCGC AACAAGGTGG CCGACATCGC CGCCGAGGGG
GGCGTGCTCA TGGGGAGCAA GGCCCTGGGC AAGGGGGACC GCCTGCTGGC CGGTGAGCTG
GTGACGGTGA CCCTGCCGCC GGAGAACCAG GCGCCGCCGG TGCTGCCGAG CACCGAGTCC
ATCCCCGGCC TGCGCGTGGT CCACGAGGAC ACCGAGATCA TCGTCGTGGA CAAGCCCGCC
GGGGTGGCCG CGCACCCGAG TGTGGGGTGG AAGGGCCCGG ACGTGGTCGG CGGGCTCGCC
GCCGAGGGCT ACCGCATCTC CACCTCCGGG GCGGCCGAGC GGCAGGGCAT CGTCCAGCGC
CTCGACGTGG GCACCTCCGG GCTCATGGTG GTGGCCAAGT CCGAGCGCGC ATACAGCGTG
CTGAAGCAGG CCTTCCGGGA CCGCGTGGTC GAGAAGACCT ACCACACGCT CGTGCAGGGC
CTGCCGGATC CGCTCCAGGG CACCATCGAC GCCCCCATCG GACGCCACCC GGGCCACGAC
TACCGGTTCG CCGTCATGTC GAACGGGCGC CCCAGCATCA CGCACTACGA GCTGCTCGAG
GCCCACCGGG CGGCGTCGCT GCTGGAGGTG CACCTGGAAA CCGGGCGCAC CCACCAGATC
CGCGTGCACT TCTCGGCCAT GGGCCACCCC TGCGCCGGTG ACCTGACCTA CGGCGCGGAC
CCGACGTTGG CCAAGCGCCT GGGCCTGGTG CGGCAGTGGC TGCACGCCGT GGAGCTGGGC
TTCACGCACC CCGGTTCCGG GGAGTGGGTG ACCTTCACCA GCGAGTACTC CGAGGACCTG
CAGGCGGCCA TCGACCAGCT CCGCGGCTGA
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| Protein sequence | MSDTRTVVVP DGLEGERVDA GLSRLLGLSR NKVADIAAEG GVLMGSKALG KGDRLLAGEL
VTVTLPPENQ APPVLPSTES IPGLRVVHED TEIIVVDKPA GVAAHPSVGW KGPDVVGGLA
AEGYRISTSG AAERQGIVQR LDVGTSGLMV VAKSERAYSV LKQAFRDRVV EKTYHTLVQG
LPDPLQGTID APIGRHPGHD YRFAVMSNGR PSITHYELLE AHRAASLLEV HLETGRTHQI
RVHFSAMGHP CAGDLTYGAD PTLAKRLGLV RQWLHAVELG FTHPGSGEWV TFTSEYSEDL
QAAIDQLRG
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