Gene Ksed_16430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16430 
Symbol 
ID8373149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1691810 
End bp1693990 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content73% 
IMG OID644991911 
Productprotease II 
Protein accessionYP_003149423 
Protein GI256825463 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1770] Protease II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.33763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0433895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCA GCATCCCCTC CCAGCCCCCG GTCGCACCCC GCCGCCCCCT CGTCCGCGAG 
CACCACGGCC AGGTCTTCAC CGACCCGTGG GAGTGGTTGC GCGACACCGA GGACCCCCAG
GTGGTGGCCC ACCTGGAGGC GGAAAACGCC TGGACCGACG AGCAGCTCGC CGACCAGGCG
CCCCTGCGGG AGACCCTCTA CGGTGAGATC GCCGGCCGCA CCCAGCAGAC CGACGTCTCG
GTGCCCGCCC GCCACGGTCA GTGGTGGTAC TACACGCGCA CCGTGGAGGG CCAGCAGTAC
CCGATCCACG CCCGGGTGGC GGCCACGGGC GAGTACGCCG CGGACCGCCC CCGGCTCGAT
GCGGGAAACG TCCCAGCGGG CGAACAGGTC CTGCTCGACG GCAACGCAGA GGCCGGGGAC
TCCACCTTCT TCTCCCTGGG CGGTTTCACC GTCAGCCGCG ACGACGCCCG GCTGGCCTTC
GCGACCGACA CCACCGGCGA CGAACGGTTC GACGTCACCG TGGTGGACCT GGCGACCGGC
GAGCGCATCG ACGAGTCGAT CACCGGGGTC GGCTACGGCC TGTGTTTCAG CCACGACGCC
AGCCAGTTGT TCTACGTGCG CGTCGACGAG TCCTGGCGCC CCCACGAGGT GTGGCGCCAC
ACCATCGGCG CCGACCCGGA CACCGACGAG CTGCTGCACA CCGAGACCGA CGAGGCCTGG
TGGATGGGGC TGGACTCCTC GGGCGACGAG CGCTGGGTGC TCATCGGCAA GGCGTCCTCG
GACTCCAGCG AGTGGTGGCT GGTGGACGCC ACCGACCCCA CCAGCCAGCC GCGGGTTGTG
CAGCCGCGCC GCGACCGCTT GGAGTACGAC GTCGACGTGG CCGGTGAGGA CCTCCTGCTG
GTGCACACCG TGAACACCCC CGAGGGGGAG CTCGCCACCG CCACGGTCGA CGCGCCGGGG
CTCGAGCACT GGCGGCAGGT CACCCCACCG GCCGACGGCG AGCGCCTGCT CGGCTGCGAG
CTGTTCGAGC ACTTCGCGCT GGTGACCCTG CGCCGCGACG GGCTCACGGG CCTGCGCGTG
CTGCCCCGCG GGGTGGACGC CGGCGGGGCC CCCCCGACCG ACGACGCTGG CGGCCTGACC
CTGGGCGCCG CGGTGGACGT GGCCCCCGAC GAGGCGCTCT ACAGCATCGG CGCCGGCGCG
AACCCGGAGT TCACCGCCAC CACGCTGCAG GTGGTCACCG AGTCCCTGAT CACCCCGCCG
ACCACCAGCG AGTACGACCT GGCGCCGCTC CTGGCCGGTG GCCCGCTGCC CGCACCCACG
GTGCTGCGCC AGCAGCCCGT CCTCGGCGGG TACGACCCCG GCGCCTACAC CCAGGAGCGG
CTCTGGGCCA CCGCGGCCGA CGACACCCGC ATCCCCATCT CGGTGGTGCG CCGCAGCGAC
CTCGAGCCCG ACGGCACCGC ACCCGGGCTG CTCACCGGCT ACGGGGCCTA CGAGGTCTCC
AGCGACCCGG ACTTCCGCAT CAGCCGACTG TCCCTGCTCG ACCGGGGCGT CGTCTTCGCC
ATCGCCCACG TGCGCGGCGG TGGCGAGATG GGGCGCGCCT GGTACGAGAG CGGTCGCATG
GAGCACAAGG CCAACAGCTT CACCGACCTC AACGCGTGCG CGCACGCCCT CATCGATGCC
GGGTGGGTCG ATGCGGGGCG CCTCGCCGTC GAGGGTGGGT CGGCCGGGGG TCTGCTGCTC
GGTGCGGCGA TCAACCTGGA GCCGGACCTG TACCGGGCGG CCCACCTGGC CGTGCCCTTT
GTGGACGCAC TGACCACCAT CCTGAACCCG GAGCTGCCGC TGACGGTGGG GGAGTGGACC
GAGTGGGGCA ACCCGCTGGC GGACCCGCAG GTCTACGAGG GCATGGCCGC CTACACGCCG
TACGAGAACG TGCGTGCGGA GCAGTACCCG GCGATGCTGG CGACCACCAG CCTCAACGAC
ACCCGTGTGG GCTGCGGGGA GCCGACCAAG TGGGTGCAGA TGGTGCGCTC CCGGGCGACG
AACGACCCCA TCGAGCGGCC CGTGCTGCTG CGCACCGAGA TGGTGGCGGG CCACGGCGGG
CGCTCCGGGC GCTACGACGC CTGGCGCGAC CGGGCGCTCG AGCTGGCCTT CCTGCTCACC
CACATCGGGG TCGATCGGTG A
 
Protein sequence
MSASIPSQPP VAPRRPLVRE HHGQVFTDPW EWLRDTEDPQ VVAHLEAENA WTDEQLADQA 
PLRETLYGEI AGRTQQTDVS VPARHGQWWY YTRTVEGQQY PIHARVAATG EYAADRPRLD
AGNVPAGEQV LLDGNAEAGD STFFSLGGFT VSRDDARLAF ATDTTGDERF DVTVVDLATG
ERIDESITGV GYGLCFSHDA SQLFYVRVDE SWRPHEVWRH TIGADPDTDE LLHTETDEAW
WMGLDSSGDE RWVLIGKASS DSSEWWLVDA TDPTSQPRVV QPRRDRLEYD VDVAGEDLLL
VHTVNTPEGE LATATVDAPG LEHWRQVTPP ADGERLLGCE LFEHFALVTL RRDGLTGLRV
LPRGVDAGGA PPTDDAGGLT LGAAVDVAPD EALYSIGAGA NPEFTATTLQ VVTESLITPP
TTSEYDLAPL LAGGPLPAPT VLRQQPVLGG YDPGAYTQER LWATAADDTR IPISVVRRSD
LEPDGTAPGL LTGYGAYEVS SDPDFRISRL SLLDRGVVFA IAHVRGGGEM GRAWYESGRM
EHKANSFTDL NACAHALIDA GWVDAGRLAV EGGSAGGLLL GAAINLEPDL YRAAHLAVPF
VDALTTILNP ELPLTVGEWT EWGNPLADPQ VYEGMAAYTP YENVRAEQYP AMLATTSLND
TRVGCGEPTK WVQMVRSRAT NDPIERPVLL RTEMVAGHGG RSGRYDAWRD RALELAFLLT
HIGVDR