Gene Ksed_15970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15970 
Symbol 
ID8373103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1641590 
End bp1642756 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content75% 
IMG OID644991865 
Productmicrococcal nuclease-like nuclease 
Protein accessionYP_003149377 
Protein GI256825417 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.339667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0582928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCC GTCGGGGGTG CCTCGGCTGT GGTTGCGCGG CCGCCGTCCT GGCGACGATC 
ACCCTGGTCG TGGCCGTGAT GGTGGCGGCG TTCGTCGCCG GCGAGGAGCC AGAGCCCGCG
GAGTCGAGTC CGGAGGCGTC GGCGGCGGCA GAGCTCGAGC CAAGCGCCAC GGCCGAGCCC
ACGGACGGCC CCGCACCGGC CGGGGAGTCC TCCGCGACGG GCGTGGAGAA GTCCGCCAGG
GGTGGGGAGG CGTCTGCCAA GGACCCCGCG CCGCAGAGCT CGTCGGCGGC GGCCCGGGCG
GCAGCCGCCC CCGTCCCCGT GCCGACCGGG GCACAGTCCC CGCGCAGCGC GGAGTCCACG
CGGACCGCCA CGGGGGAGCC GAGCGCCCCC GCGCCGGAGA GCTCGTCGGC GTCGCCCTCG
ACGACCTCCG CGCCTGCCCC GACGCCCGAG GTCGCGCCGA GCACCGAGAG GGCCGTGGCC
CCGGCGAGGG CAGCGAGCAG CGAGTCCGGA CCGGTGGTGA AGGTCGTCGA CGGGGACACC
ATCGACGTGG CCACCGCTAA CGGGACCGAG CGCATCCGCA TCATCGGCCT GGACACCCCG
GAGATCGGGG AGTGCGGGTT CAGCGAGGCC TCGGCCGCCA TGGCCGACCT GGTGGCGGGG
CGCTCGGTCC AGCTGGTGCG CGACCCCACC CAGGACAACC GTGACCGCTA CGGCCGCCTG
GTGCGCCACG TGCACCGTGG CAACACCTCG GCGGCCGTGG AGATGATCCG CCGCGGACAC
TCGGCCGAGT ACCTCTACGG AGCCGAATAC CAGAACCGGT CGGCACACCT GCGGGCCGAG
CGGGAGGCCC GGGCCGCGAA GGTGGGCATG TGGTCGACGC GCGGCTGTGC CACCCCGACG
CCCACGCCGA GCCCGACGCC CACGCCGAGC CCCACCCCGA CCGAGCCGGT GACCGTGGTG
GCCCCGCCCG AGCCCACGCC CACGGCACCC GCACCCACCG GGAGCTGCCG CATCAAGGGG
AACATCTCCA GCAGTGGGGA GAAGATCTTC CACTCCCCGG GCCAGGCGCA CTACGAGCGC
ACCAAGATCT CGCTGGACAA GGGAGAGCGC TGGTTCTGCT CCGCGGCCGA TGCCGTGAAG
GCGGGGTGGC GAGCCGCCAA GCAGTGA
 
Protein sequence
MNRRRGCLGC GCAAAVLATI TLVVAVMVAA FVAGEEPEPA ESSPEASAAA ELEPSATAEP 
TDGPAPAGES SATGVEKSAR GGEASAKDPA PQSSSAAARA AAAPVPVPTG AQSPRSAEST
RTATGEPSAP APESSSASPS TTSAPAPTPE VAPSTERAVA PARAASSESG PVVKVVDGDT
IDVATANGTE RIRIIGLDTP EIGECGFSEA SAAMADLVAG RSVQLVRDPT QDNRDRYGRL
VRHVHRGNTS AAVEMIRRGH SAEYLYGAEY QNRSAHLRAE REARAAKVGM WSTRGCATPT
PTPSPTPTPS PTPTEPVTVV APPEPTPTAP APTGSCRIKG NISSSGEKIF HSPGQAHYER
TKISLDKGER WFCSAADAVK AGWRAAKQ