Gene Ksed_15470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15470 
Symbol 
ID8373053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1587096 
End bp1588037 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content73% 
IMG OID644991815 
Productbranched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
Protein accessionYP_003149331 
Protein GI256825371 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0160772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG TACAGCCCAT CGTCTGGGTG AATGGCCGCC TCGTGCCGGC CGACCAGGCC 
GCCATCCTGC CCATCGACCA CGGCATCACC GTCGGCGACG GGGTCTTCGA GACAGCCGAG
GTCCGCGACG GCCGGGTCTT CGCACGTACC CGCCACCACG ACCGGATGGA GCGTTCGCTC
GCCGGCATCG GCCTGGCGCC GCTGGACCGG GCCCGGCTCG ACGAGGGGAT CGATGCGGTG
CTGGCCGCCG CGGGCGAGAA GGGGAGCGTC CCACCGCTGG CGCGCCTGCG CTACACGGTC
ACCGGAGGGC GCGGGCCGCT GGGCTCGGGT CGCTACGAGA CCGAGCCCAC CTACATCGTG
GCCCTGGCTG CCGACCCGGG CATGGAGGGG CCGACCACCG TCGCCGTGGG CCCGTGGCGC
CGCAACCTGT ACTCGACGGT CACCGGCCTG AAGACCACCT CGTACGCCGA GAACGCCGTG
ATGCTGCTGG CGGCCGGGCA GGTGGGCGCC ACTGAGTGCC TGTTCGCCAC CAGCGACGGC
GACCTGTGCG AGGGCACCGG CTCCAACACC TTCGTCGTGA CCGACGGGGT CGTGCGCACC
CCGGGCCTGG ACCGGGGGCC GCTGGCCGGC GTCACCCGCG GCCTGGTGAT CGAGTGGGCC
CGCGCGGCCG GCATCGAGGT CCGCGAGGAG CAGATGCCCA TGGCGGACCT GGCCACGGCG
GACGAGCTGT TCATCACCAG CTCCATCCGG TCGATCCAGC CGGTGGACCG CCTGGTGGAG
ATCGCCGAGT CGCCGGTCGC CACGGCGCCG GGCCTGGCCG CGCCGCCGGC ACCCTCGCAG
CAGCACGGGG TCTCGTTCGA CCGTACGCTC GAGGTGGGGC CGGTGACTCG CCGTCTGCAG
GAGCTCTTCC GCGAGAACGC TGCGGCCACC CCGGACCCGT GA
 
Protein sequence
MNDVQPIVWV NGRLVPADQA AILPIDHGIT VGDGVFETAE VRDGRVFART RHHDRMERSL 
AGIGLAPLDR ARLDEGIDAV LAAAGEKGSV PPLARLRYTV TGGRGPLGSG RYETEPTYIV
ALAADPGMEG PTTVAVGPWR RNLYSTVTGL KTTSYAENAV MLLAAGQVGA TECLFATSDG
DLCEGTGSNT FVVTDGVVRT PGLDRGPLAG VTRGLVIEWA RAAGIEVREE QMPMADLATA
DELFITSSIR SIQPVDRLVE IAESPVATAP GLAAPPAPSQ QHGVSFDRTL EVGPVTRRLQ
ELFRENAAAT PDP