Gene Ksed_15320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15320 
Symbol 
ID8373038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1574962 
End bp1576035 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content75% 
IMG OID644991800 
ProductHolliday junction DNA helicase subunit RuvB 
Protein accessionYP_003149317 
Protein GI256825357 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.280238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACC CCTGGGACCG TTCGGGCACC GACGAGAGCT CGCCCCGCAT CGTGGACCCG 
GCCGCCGGGC AGGACGACGC GGGCTTCGAC GCGGCGCTGC GCCCCAAGCG GCTGGCGGAC
CTCGCCGGCC AGGACCGGGT GCGCGACCAG CTCCACCTCG TGCTGGAGGC GGCGCGGCGC
CGGGGGGCGC CGGCCGACCA CATCCTGCTC TCCGGCCCGC CGGGCCTGGG CAAGACCACC
CTGGCCATGA TCGTGGCGGG GGAGATGGCC GCCCCCATCC GGATCACCTC CGGCCCGGCG
ATCCAACACG CGGGGGACCT GGCCGCGATC CTGTCCTCGC TGGCCGAGGG GGAGGTGCTC
TTCCTCGACG AGATCCACCG CATGTCGCGG GCCGCCGAGG AGATGCTCTA CCTCGCCATG
GAGGACTTCC GGGTCGACGT CATCGTCGGC AAGGGCCCCG GGGCCACCGC CATCCCACTG
GAGCTGCCGC CCTTCACCGT CGTGGGGGCG ACCACCCGCT CCGGCCTGCT CCCGGCGCCG
CTGCGCGACC GCTTCGGCTT CACCGGGCAC CTCGACTACT ACACGGCCGA GGACCTGGCC
ACGATCCTCG CGGGGAACGC GGTGAAGCTG GGCATCGAGA GCGAGCCTGA GGGCATCTCC
GAGATCGCGG GACGCTCCCG GGGTACGCCC CGCATCGCCA ACCGCCTGCT GCGGCGCGTG
CGGGACTGGG CGCAGGTGCA CGGCCAGCAC GTGGTCTCCG CCGAGGCCGC CCGCGAGGCC
CTCGCGCTGT TCGATGTCGA CCTGCTGGGG CTCGACCGGC TCGACCGGGC CGTGCTCGAG
GCCCTGTGCC ACCGCTTCGA CGGGGGGCCG GTGGGCCTGA CGACACTGGC GGTGGCCGTG
GGGGAGGAGG CCGACACCGT GGAGACCGTG GCCGAGCCCT ACCTCGTGCG CGAGGGATTC
ATCGTCCGGA CCCCACGCGG CCGGGCGGCG ACGACCGCCG CGTGGGAGCA CCTCGGGACC
CGACCCCCGA CCGGCCCAGC GGGTCGTTTC GGTCACCAAC CACCCCTCGC CTAG
 
Protein sequence
MSDPWDRSGT DESSPRIVDP AAGQDDAGFD AALRPKRLAD LAGQDRVRDQ LHLVLEAARR 
RGAPADHILL SGPPGLGKTT LAMIVAGEMA APIRITSGPA IQHAGDLAAI LSSLAEGEVL
FLDEIHRMSR AAEEMLYLAM EDFRVDVIVG KGPGATAIPL ELPPFTVVGA TTRSGLLPAP
LRDRFGFTGH LDYYTAEDLA TILAGNAVKL GIESEPEGIS EIAGRSRGTP RIANRLLRRV
RDWAQVHGQH VVSAEAAREA LALFDVDLLG LDRLDRAVLE ALCHRFDGGP VGLTTLAVAV
GEEADTVETV AEPYLVREGF IVRTPRGRAA TTAAWEHLGT RPPTGPAGRF GHQPPLA