| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_15250 |
|---|
| Symbol | |
|---|
| ID | 8373031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1564869 |
|---|
| End bp | 1565567 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644991793 |
|---|
| Product | Zn-dependent hydrolase, glyoxylase |
|---|
| Protein accession | YP_003149310 |
|---|
| Protein GI | 256825350 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.00905017 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACCC TCGCCATCCC GGCCACCGCT TTCGGTACCA ACTGCTACGT CGTCGCACCG
GATCGCGGTG AGGAGTGCGT CGTCATCGAC CCGGGCTTCG GCGTGGTCGA CCAACTGCGG
GATGCGTTGC GCGAGAACGG TTTGCGTCCT GCCGCCGTCC TCCTGACGCA CGGCCACCTC
GACCACACCG CGAGCGTCAC CCCGGTGTGC GGCGGCACCG TCGGCGCCTA CATCCACACC
GACGACCGCT ACCGACTGAC CGATCCGCGC AAGGGCTTGT CCGCACCGAT GTGGGCGATG
CTGCAGCAGG AGTACGGCAG TTCCTTCCAG TGGTCGGAGC CCGACGAGGT CCACGAGTTC
ACCGATGCGG CGCAGCTCGA GATCGCCGGT CTCACCTGGG GCGTGCGCCA CGCGCCGGGG
CACACCGAGG GCAGCGTGCT CTTCGACGTG GCGGACGTGC CCGCGCAGGT GGCGCAGGCG
GGCTCGGACC TGCGGGCCAG CACCTTCACC GGTGACGTGC TGTTCGCCGG CTCCATCGGC
CGCACCGACC TGCCGGGTGG CGACCCCGCG GCCATGCAGC GCTCCCTGCG GGAGGTCGTG
CTCCCCACCG ACGACCACAC GATGGTGCTT CCCGGCCACG GACGACCGAG CACCATGGCC
CACGAGCGGG CGTCCAACCC CTACCTGCAG GGGCTCTGA
|
|---|
| Protein sequence | MFTLAIPATA FGTNCYVVAP DRGEECVVID PGFGVVDQLR DALRENGLRP AAVLLTHGHL
DHTASVTPVC GGTVGAYIHT DDRYRLTDPR KGLSAPMWAM LQQEYGSSFQ WSEPDEVHEF
TDAAQLEIAG LTWGVRHAPG HTEGSVLFDV ADVPAQVAQA GSDLRASTFT GDVLFAGSIG
RTDLPGGDPA AMQRSLREVV LPTDDHTMVL PGHGRPSTMA HERASNPYLQ GL
|
|---|
| |