Gene Ksed_15200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15200 
Symbol 
ID8373026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1560434 
End bp1561195 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content74% 
IMG OID644991788 
Productcondensin subunit ScpB 
Protein accessionYP_003149305 
Protein GI256825345 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0138487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACC AGCACCCGAC CACCCCCGAC GATGCGGCGG CGCCCGCCGA CCCGGTCCGC 
CCGCTTGGTG ACCCCCCAGC CGACCCGCCC GCCGACCTCC CGGCCGCCCT GGAGGCCGTG
CTGATGGTGG TCGACGAGCC GGTCACGCCG GCGGAGCTCG CCGAGGGGCT CGGCTCCGAG
GTGGAGGTGG TCGAGGCCAC GCTGCGCGAG CTCGCCGCCG GCTACACCGC CCAGGGCCGG
GGTTTCGACC TGCGGGCCGT CGCCGGCGCC TGGCGGATGT ACTCGCGCCC GGAATACGCC
GATGCGGTGG AGCGCTTCCT CATCGGCGGT CGACAGGCGC GGCTCACCCA GGCCGCGCTG
GAGACGCTGG CGGTCATCGC GTACCGTCAG CCGATCAGTC GGGGCCGGGT GGCCGCGGTG
CGTGGCGTCA ACGTCGACGG AGTGGTCCGC ACCCTGACGG CGCGCGGCCT CATCGCGGAG
GTCGGCAGCG AACCCTCGGG CGCGGTGCTC TACGGCACCA CCCACCAGTT CCTCGAGCGC
ATGGGTCTGG ACGACCTCAG CGGGTTGCCC GACCTCGCTC CCCTCCTCCC CGACGCCGGG
GACCTCGAGG AGATCGCAGC AGGTGTCCGC GTCCCGCAGG ACACCAGCAC CACCGAGGAA
CCCGACCCGG GTGCCGCGCC CCCTGACGAG CCCGTCGCCA CCGACGAGCC CGCCCCGACC
GACCAGACGA TGCAGCAGAC GCAGGAGAGT GAGCACGGAT GA
 
Protein sequence
MSDQHPTTPD DAAAPADPVR PLGDPPADPP ADLPAALEAV LMVVDEPVTP AELAEGLGSE 
VEVVEATLRE LAAGYTAQGR GFDLRAVAGA WRMYSRPEYA DAVERFLIGG RQARLTQAAL
ETLAVIAYRQ PISRGRVAAV RGVNVDGVVR TLTARGLIAE VGSEPSGAVL YGTTHQFLER
MGLDDLSGLP DLAPLLPDAG DLEEIAAGVR VPQDTSTTEE PDPGAAPPDE PVATDEPAPT
DQTMQQTQES EHG