Gene Ksed_14960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14960 
Symbol 
ID8373003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1538052 
End bp1538762 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content73% 
IMG OID644991766 
Productpredicted transcriptional regulator 
Protein accessionYP_003149284 
Protein GI256825324 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0208149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.635485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGG AGGGTCGCCA CACCATCGGG CAGGTGGTCC GTGAGCTGTC CGGGGACTTC 
CCCGACCTGA CGATCTCCAA GGTGCGCTTC CTGGAGGGCA AGGGGCTGAT CACCCCCGAG
CGGACCGCCT CCGGCTACCG CCTCTTCTCC GACGACCAGG TGGAGCGCCT GCGGTTCATC
CTGACCTCCC AACGCGACCG CTTCTGGCCG CTGAAGGTGA TCGCCGACGC CCTGGACCAG
ATGGACCGCG GGTTGGACGT GGACCTCGAC GCCCCCGCCC CGGGTCGCCC GGCACCGCCT
CCGCTGGGGG CGCTGCGCGC CGGGGGAGGG ACGCCCGTGG AGGCCGCTGC CTTCGCACCC
GGTGAGCAGG CCGTGCGGGT CAGCCGCGCC GAGCTGTGCC GGAACGCCGA GGTCACTGCC
GAGCAGCTGC AGGACATGGC CTCCTTCGGT CTGGTGCAGG CCGACAAGGA CGGGTGGTAC
ACCGCCCTGG ACGTGGAGAT CGCCCGGGCG GTGGGCACCT TCGCGAGCTT CGGGCTCGAG
CCGCGCCACC TGCGCATGTT CCGCCTCGCC GCCGACCGCG AGGCCGCCCT GGTGCAGCAG
ACCCTCACCT CCTTCCGCCC CGCCCCGGAG CAGCGGGACG AGATGCGGGC CCGGCTCGCC
GCTGCGTGCC TCTCGCTGCA CGTCGCCCTG GTGCGCGCCG AACTGGGCTG A
 
Protein sequence
MTGEGRHTIG QVVRELSGDF PDLTISKVRF LEGKGLITPE RTASGYRLFS DDQVERLRFI 
LTSQRDRFWP LKVIADALDQ MDRGLDVDLD APAPGRPAPP PLGALRAGGG TPVEAAAFAP
GEQAVRVSRA ELCRNAEVTA EQLQDMASFG LVQADKDGWY TALDVEIARA VGTFASFGLE
PRHLRMFRLA ADREAALVQQ TLTSFRPAPE QRDEMRARLA AACLSLHVAL VRAELG