Gene Ksed_14020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14020 
Symbol 
ID8372910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1447611 
End bp1448432 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID644991676 
Producttwin arginine targeting protein translocase subunit TatC 
Protein accessionYP_003149194 
Protein GI256825234 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.00236204 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0970018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCCC GCACCCCCTT CCGCCGGAAG GCCTCCAACC CCGAGGGCCG CATGGCCCTG 
TTGGACCACT TCAAGGAACT CCGCAACCGC CTGCTCCTCG CGGCGGCTGC GGTGTTCGTC
GGGCTCTGCG TGGGCTGGTA CTACTACGAG GAGATCGCTG ATTTCCTCAT GCAGCCCGTC
GTGGACGTGG CGGAGGAGCG GGGCACTGAA CTCTCCATCA ACTTCGGCGC CGGTGGCGTG
ACGCAGCCGT TCACCATCAA GGCCAAGATC GCCGCGGTGG TGGGCGTGAT CCTCGCCAGC
CCCATCTGGC TCTGGCAGTT CTGGGCGTTC ATCCTGCCTG GGCTCTACCG GCGCGAGAAA
CTCATCGCGT TCGGCTACTT CCTGGTGGCC GTGCCGATGT TCCTGGCCGG CTGCCTGCTG
GCCATCTGGG CCCTGCCAAC GGCCGTGAAG ACTCTTCTGG CAGCCTTCAT CCCCGAGGGG
GGCGGGAACT TCACCGCCGC CGAGCCCTAC TTCGCCTTCG TGGGCAACTT CATCCTCTGG
TTCGGGGTGG CTTTCCTGCT GCCGGTGGTG ATGGTCGCCA TCAACCACGC GGGCCTGCTG
TCCGGGCGGG TGATGCTCAA GGGGTGGCGC TGGGCCACCG TGGGCGTGCT GGTGTTCGCC
GCCATGGCCG CCCCGGACCC CATGTCCATG GTGACGCTCA CCATCCCGAT GATGCTCATG
TACTTCGTCG CCTGCGGCAT CGCCATGGTG CGCGACAAGG CGCGCCGGCG GAAGCGGCCC
GAGTGGATGG ACGCCGACGC GGACACTGCC TCGGCGCTCT GA
 
Protein sequence
MTPRTPFRRK ASNPEGRMAL LDHFKELRNR LLLAAAAVFV GLCVGWYYYE EIADFLMQPV 
VDVAEERGTE LSINFGAGGV TQPFTIKAKI AAVVGVILAS PIWLWQFWAF ILPGLYRREK
LIAFGYFLVA VPMFLAGCLL AIWALPTAVK TLLAAFIPEG GGNFTAAEPY FAFVGNFILW
FGVAFLLPVV MVAINHAGLL SGRVMLKGWR WATVGVLVFA AMAAPDPMSM VTLTIPMMLM
YFVACGIAMV RDKARRRKRP EWMDADADTA SAL