Gene Ksed_14000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14000 
Symbol 
ID8372908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1446157 
End bp1447188 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content76% 
IMG OID644991674 
Productpredicted transcriptional regulator 
Protein accessionYP_003149192 
Protein GI256825232 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.0168164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.101985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCG AGTCCGCCAC CGCCCGTCTG GAACGACTGC TCTCGATGGT GCCGTGGCTG 
CTGCAGCGCC AGGGCGTCGA GATCGAGGAG GCGGCCCGCA CCTTCGGGGT GACGCCGGCC
TCGCTGGAGC GCGACCTGCA GCTGATCTTC ATGTGCGGCC TGCCGGGGCG GATGCCGGAC
GACCTCATCG AGGCCGAGTG GGCCGGCGGG CACGTCTACC TGCGCAACGC CGACACCATC
GCCCGCCCGC TGCGGCTCGG CCCGGACGAG GCCACCGCGC TGGTGGCCGG TCTGCGCTCG
GTCGCCGGCG CCCCCGGCCT GCCCGCCGAG GACCGCGAGA ACGCCCACCG GCTGGCCGAG
CGGATCGTGG GGGCGGCCGG CCCGCTGCGC TCCCTGGTGG AGGGCACCGT GGTGCAAGAG
GCCGCCTCCC CGCAGGACGA CCCGCTGGCC GCCGACCTGC GCCGGGCCGT GCAGGAGCAG
CGCCGGGTGC GGCTGGTGCA CGTCGCCCAC GGTCGCGACG AGGCGAGCAC CCGGGAGGTT
TCCCCGATGC GGGTGGTCGC CGTGGACGGG CAGACCTACC TCGAGGCGTG GTGCCACACC
GCCCAGGGGG TGCGCCTGTT CCGGCTGGAC CGCATCGCCT CCGCGCAGGT GCTGGACGCC
GACGGCACCC CGCCGCTGGA GGCCGAGCCG AAGGACCTGG ACGCCGGCAC CTATGCGGGC
GGGCCGGACG ACGTGGAGGT GGTGCTGGAC CTCAGCCCGG AGGCCGACTG GGTGGCCGAG
TACTACGGCG CGGTGGACCT GGAGGAGCTG TCCGTCCCGC CGGCCGGGGC CACGGACCTG
CGCGAGCCAG CTGCGGGCCG CCGCCGCGTG GTGGTCCGGG CGGCGGACCC CTCGTGGGTG
AAGCGCCTGG TGTGGAGCAC CGGTGGAGCG GTGATGGTGG CCGCGCCGGG GACCCTGGTG
GCAGAGGTGC GCCAGGGGGC CCACACCGCA GTCGCACGGT TGTCCCGGCG CTCCGCGGCT
ACCGTAGAGT GA
 
Protein sequence
MAAESATARL ERLLSMVPWL LQRQGVEIEE AARTFGVTPA SLERDLQLIF MCGLPGRMPD 
DLIEAEWAGG HVYLRNADTI ARPLRLGPDE ATALVAGLRS VAGAPGLPAE DRENAHRLAE
RIVGAAGPLR SLVEGTVVQE AASPQDDPLA ADLRRAVQEQ RRVRLVHVAH GRDEASTREV
SPMRVVAVDG QTYLEAWCHT AQGVRLFRLD RIASAQVLDA DGTPPLEAEP KDLDAGTYAG
GPDDVEVVLD LSPEADWVAE YYGAVDLEEL SVPPAGATDL REPAAGRRRV VVRAADPSWV
KRLVWSTGGA VMVAAPGTLV AEVRQGAHTA VARLSRRSAA TVE