| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_13690 |
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| Symbol | |
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| ID | 8372877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 1420013 |
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| End bp | 1423234 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644991644 |
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| Product | helicase, type I site-specific restriction-modification system restriction subunit |
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| Protein accession | YP_003149162 |
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| Protein GI | 256825202 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.161894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACG TCCACAAGGA ACTGGCCATG GAGGACGAAG CAGTCGCCCA GTTGGCTACG
CAGGGGTGGG TCTACGAGGA GGGCTCTGCG GCTCGCTACG ACAAGCAGCG TGCCCTCTTT
CCCGAGGACG TCTTCGCGTG GCTGGAGGCC ACCCAGCCGG ACGAACTGGC CAAGCACCTG
AAGCCGGGCT TGGACCCTGC CGCTCAGGCG AAGGCTCGCA ACGGCATCCT GGACGCCCTC
GCTGACACGC TGAGCAACGT CGGTGGCGGT GGGGGCACGC TGACTGTCAT GCGAAAGGGA
TTTCGACGCA TCTCTTCGCG CTTCCAGATG GTGCAGGCCA AGCCCACTGA GTCCATGAAC
CCGAAGACGG TCAAGGACTA CGAGTCGAAC ATCCTGCGCG TCGTCCGGCA GGTGCACTAC
TCGACCACCA ACGCGAAGAA GTCCATCGAC CTGGTGCTGT TCTGCAATGG CATCCCGGTG
ACGACCATCG AATTGAAGAC CGAGTTCACC CAGTCCGTGA CGCGCGGTCA GGTGCAGTAC
AAGAACGACC GCGACCCGGG CACGGACGGC AAGGACGTCC TGCTGGCGTG GGGCAAGCGC
GCGCTCGTGC ACTTCGTCGT GACCGACAAC GAGGTCTCGA TGACCACGAA GTTGGCCGGG
AGCAAGACCA CCTTCCTGCC CTTCAACCAG GGCAACGGAT CAGGCAAGGG CAACCCGCTC
AACCCGGACG GTGCACGTAC CGAGTACTTC TGGCGGGACG TGCTCGACCC GGATGCCTTC
CTGACGATCC TGACCAAGTA CCTCGTGGTC CGCACGGATG AGAAGCCGGA CCCGGTGACG
GGTAAGGCGG AGAAGTCCAC GTCGCTGCGG TTCCCGCGCT TCCACCAGTG GGATGCGGTG
GAGAGGGTCA TCTCGCGGGT GGCGGAGCAG GGGGTGGGTG AGCGGTACCT CATCGAGCAC
TCGGCTGGCT CGGGCAAGAC GGACACCATC GTCTGGACGG CGTTCCGGCT CGCGGCGCTG
CACGACCAGT CGAACAAGAA GGTCTTCGAC TCGGTGATCG TGGTGACCGA CCGCAACGTG
CTGGACAAGC AGATGAGCGC AGCCATGCGT CAGTTGGACC CGCACGGCGC GCAGATGGTC
CGCATCGACG GGTCCGGGGC GTCGAAGTCC AGTGAACTGG GCGAGGCGCT GCGGCTGAAG
ACGCCAATCA TCGTGGTGAC GATCCAGACT GCGCCCTTCG CGTTGAAGTA CCTGCGTGAG
CAGGCCGACG CATCGGGCGG GCACTTCGCG GTCATCGCGG ACGAGGCCCA CTCGTCCCAG
ACCGGGACGG CTGCGGCCAA GTTGAAGGCC GTCCTGAGTC CGCAGGAGCA GTCGGACGTT
GAGGACGGCG GGGAGGTCGA TGCGCAGACG CTGCTGGCGG CTGAACTACC GCAGCGGGCC
GAGACGCCGA ACCTGACCTA TCTCGCCTTC ACGGCGACCC CGAAGTCCAA GACCCTCGAA
CTGTTCGGCA CACCGGACCC GCAGGACACC GGCGAGGACG GCAACCCGAG GCCCAAGCCG
TTCCACCGCT ACACGATGCG TCAGGCCATC GAGGAGGGCT TCATCCTCGA CGTGCTCCAG
AACTACACCG AGTACGACGT CGCCTATGAG TTGGGCTTGA AGGTCAAGGA CGAGGCCGTC
GAGTCCGTCG ACAAGGAGGC CGCTCGCAAG GCCGCTCAGC GCTGGGTGAT GCTGCACGAG
CACAACATCT CCCAGAAGGT CGACATCATC ATTCGGCACT TCCGCGAGAA CATCGCCGGG
ATGCTGGGTG GCACCGCCAA GGCGATGATC GTGACCTCCT CGCGCAAGCA CGCCCTGCGG
TACTACAACG CCATCGAGCG GTACGTGGCC AAGCACGGCT ACGACGACGT GCATGCCTTG
GTCGCCTTCT CCGGCAAGGT CACCGTCGCC GACGACGACA CCGACGTCAG GCCCGACGAC
CTGCTCGGCG TGGGTGAGTA CACCGAGGCG AGCGTCAACA CCGGCACGAA GAACAAGGCG
CTGGACGACG CCTTCAATGG CCCCGCCTAC CAAGTGATGA TCGTGGCCAA CAAGTTCCAG
GTCGGCTTCG ACCAGCCGCT GTTGTGCGCG ATGTACGTCG ACAAGCGACT CGACGGCGTG
ATGGCCGTCC AGACCCTCTC GCGCCTCAAC CGCACCTGGG CGGGCAAGGA CCACGTGTAC
GTCCTCGACT TCGTGAACAA GGGCGAGGAC ATCCTCGCGG CATTCCAGCC GTACTACGAG
GGGGCCGAGT TGGGGGCCGT CACCGACCCC GACCTGCCGA ACCGCCTCGC GGTGAAACTG
GACGACGTGG GCAGGGACCG CATCTACACG ATGGCCGAGA TCGAGGCTGC CGCTGTCGCC
GCGACCGATC CCAACGGAAC GCACAAGGCG CTGACTGCCG CCATCGACCC GGCAACGGAG
CGCTTCGGTG ATCTGCTGAG GCAGGCCCGG GAGGACAAGG ACGACGAGGA GCGAACGCGG
CTGGAGGGCT TCCGTTCGGA CCTGTCCAAC TACGTGAACG CCTACGACTT CCTTTCGCAG
ATCGTCCCCT ACGACCTGGA GATGGAGAGC CGCTCGATCT ACTACCGCAT GCTCGCCAAG
CGTCTGCGGG ATGAGAACTC CGGCATCGTC GTGGAGATCG GCCCGGTCGC CCTGGCCAAG
TACAAGGTCG AGAGCAAGGG CGCTCGGACG CTCGACCTGA CGTCCGGGCA GGCCACTCCG
TTGAGCCCGC TGGCTGAGAT GGGCACCGCC GAGGCGCGTG AGCGGGAGCA GGCCCATTGG
GCGGACATCA TCGACGCCAT CAACTCCCTC TTCGCGGACA GCGGCCTGAG CCCCGACGAC
GCGGTGCCCG AGATCGAAGG CATCCTCAGG GACGCGAAAA GAGACCCGGA CCTCGTGGCG
AAGGCCAAGG CCAACAGCGA CGCCGACTTC AACGCTGACA ACACGGTCGT GGCCTCGGTG
CTGAGCAAGT TCATCGACCG CCGCGAGAAG AGCGAGGAGA TCGTCAACGC TCTGCTGAAG
GGGCAGAATA TGGACACGTT CGCCCAACTG CTCGCCATGC TCGGCTTCCG GGAGTACCTC
GCCACCGTCG ACTACCACTT CCCGAATGAG AACGTCGCTG TCGAGGTCGA GGCTCAACAC
TCTCCATCGA CTGCCAAGGC CAATGAGGGG GCCAGGGCAT GA
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| Protein sequence | MTDVHKELAM EDEAVAQLAT QGWVYEEGSA ARYDKQRALF PEDVFAWLEA TQPDELAKHL
KPGLDPAAQA KARNGILDAL ADTLSNVGGG GGTLTVMRKG FRRISSRFQM VQAKPTESMN
PKTVKDYESN ILRVVRQVHY STTNAKKSID LVLFCNGIPV TTIELKTEFT QSVTRGQVQY
KNDRDPGTDG KDVLLAWGKR ALVHFVVTDN EVSMTTKLAG SKTTFLPFNQ GNGSGKGNPL
NPDGARTEYF WRDVLDPDAF LTILTKYLVV RTDEKPDPVT GKAEKSTSLR FPRFHQWDAV
ERVISRVAEQ GVGERYLIEH SAGSGKTDTI VWTAFRLAAL HDQSNKKVFD SVIVVTDRNV
LDKQMSAAMR QLDPHGAQMV RIDGSGASKS SELGEALRLK TPIIVVTIQT APFALKYLRE
QADASGGHFA VIADEAHSSQ TGTAAAKLKA VLSPQEQSDV EDGGEVDAQT LLAAELPQRA
ETPNLTYLAF TATPKSKTLE LFGTPDPQDT GEDGNPRPKP FHRYTMRQAI EEGFILDVLQ
NYTEYDVAYE LGLKVKDEAV ESVDKEAARK AAQRWVMLHE HNISQKVDII IRHFRENIAG
MLGGTAKAMI VTSSRKHALR YYNAIERYVA KHGYDDVHAL VAFSGKVTVA DDDTDVRPDD
LLGVGEYTEA SVNTGTKNKA LDDAFNGPAY QVMIVANKFQ VGFDQPLLCA MYVDKRLDGV
MAVQTLSRLN RTWAGKDHVY VLDFVNKGED ILAAFQPYYE GAELGAVTDP DLPNRLAVKL
DDVGRDRIYT MAEIEAAAVA ATDPNGTHKA LTAAIDPATE RFGDLLRQAR EDKDDEERTR
LEGFRSDLSN YVNAYDFLSQ IVPYDLEMES RSIYYRMLAK RLRDENSGIV VEIGPVALAK
YKVESKGART LDLTSGQATP LSPLAEMGTA EAREREQAHW ADIIDAINSL FADSGLSPDD
AVPEIEGILR DAKRDPDLVA KAKANSDADF NADNTVVASV LSKFIDRREK SEEIVNALLK
GQNMDTFAQL LAMLGFREYL ATVDYHFPNE NVAVEVEAQH SPSTAKANEG ARA
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