Gene Ksed_13390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13390 
Symbol 
ID8372847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1389270 
End bp1389761 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content69% 
IMG OID644991614 
ProductSUF system FeS assembly protein, NifU family 
Protein accessionYP_003149133 
Protein GI256825173 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.00685407 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGT ACGCCGAGAT CATCCTCGAC CACTCCAAGA ACCCGCAGAA CGCCGGGCTC 
CGGGAGCCGT ACGAGGCCGA GGTGCACCAC GTGAACACCT CCTGTGGCGA TGAGGTGACG
GTCCGGGTGC ACGTGGACAC CAGCACCGAG CCGCCCCGCA TCGTCGACGT CTCCTACGAC
GCGATGGGGT GCAGCATCTC CACCGCGTCG ACCTCGGTGA TGACCGAGGA GACCATCGGG
CACGACGCCA CCGAGGTGGC CGGGAGCCTG GCGGAGATGA GGAAGATGCT CACCTCGCGC
GGCCAGTACG GCGGCGACGA GGAGCTCATC GGCGACGGCG TCGCCTTCGC CGGGGTGTCC
CAGTACCCGG CGCGCGTGAA GTGCGCGCTG CTGGGCTGGA CCGCCCTGAC CGACGCCCTC
GCCCGCGCCG GGGTGGACAT CACCGGCTCG AAGCAGGACA GTGAAGTACC GACGAACGGA
GCACAGGCAT GA
 
Protein sequence
MDLYAEIILD HSKNPQNAGL REPYEAEVHH VNTSCGDEVT VRVHVDTSTE PPRIVDVSYD 
AMGCSISTAS TSVMTEETIG HDATEVAGSL AEMRKMLTSR GQYGGDEELI GDGVAFAGVS
QYPARVKCAL LGWTALTDAL ARAGVDITGS KQDSEVPTNG AQA