Gene Ksed_13310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13310 
Symbol 
ID8372839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1381768 
End bp1382505 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content74% 
IMG OID644991606 
ProductABC-type multidrug transport system, permease component 
Protein accessionYP_003149125 
Protein GI256825165 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.455926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCT CCCCCACCCA GCGCGTGCTG GCCCAGGGCC GCTACGAGAC CGGAGTGCTG 
CTCCGCAACG GCGAGCAGCT GCTCGTCTCG CTCGCCCTGC CCCTGCTCGC CCTGCTGGCC
CTGGCCTTCA CGACCTACCC GTCGCTCGGC GAGGGCGAGC GGATCGACCT GGCCGTTCCG
GGCGTCCTCG CCCTGGCCAT CATGTCCACG GCCTTCACCG GTCAGGCGAT CTCATTGGCC
TTCGACCGCC GCTACGGGGT GCTGCGTCTC TTCGGCACGA CCCCTTTGGG CACCAGTGGC
CTCGTCGCCG GCCGGGTGCT GGCCGTGCTG GCCGTGATCA CCCTGCAGGT GGTGGTGCTC
GGCGCGGTGG GCCTGCTGCT GGGCTGGCGG CCGGAGCTCG TCGGCATGGC GCCGGCGCTG
GCGGTGGGGG TCCTGGGCGC CGCTGCGTTC GTGGTGCTGG CCGTCCTCGT GGGCGGTCGG
CTGCGGGCCG AGGCGGTGCT GGCGGTGGCC AACCTGCTGT GGGTGGTCTT CCTCGCCCTG
GGCAGCCTGT TGCCCAGCGA GCGGTTCGGT GAGCCCTGGG CGCAGCTGGT GCGGCTCACC
CCATCGGGCG CCCTGGGTGA CGGCCTGCGG GCGGCGCTGG CCCACGGGCA GTGGGACCTC
GGCGCCCTGG CGGTGCTGGC CGCGTGGGCG GTACTCGGCG GCCTTCTGGC CACGCGCGTC
TTCCGCTGGT CGGACTGA
 
Protein sequence
MSTSPTQRVL AQGRYETGVL LRNGEQLLVS LALPLLALLA LAFTTYPSLG EGERIDLAVP 
GVLALAIMST AFTGQAISLA FDRRYGVLRL FGTTPLGTSG LVAGRVLAVL AVITLQVVVL
GAVGLLLGWR PELVGMAPAL AVGVLGAAAF VVLAVLVGGR LRAEAVLAVA NLLWVVFLAL
GSLLPSERFG EPWAQLVRLT PSGALGDGLR AALAHGQWDL GALAVLAAWA VLGGLLATRV
FRWSD