Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_13310 |
Symbol | |
ID | 8372839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 1381768 |
End bp | 1382505 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644991606 |
Product | ABC-type multidrug transport system, permease component |
Protein accession | YP_003149125 |
Protein GI | 256825165 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.455926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCACCT CCCCCACCCA GCGCGTGCTG GCCCAGGGCC GCTACGAGAC CGGAGTGCTG CTCCGCAACG GCGAGCAGCT GCTCGTCTCG CTCGCCCTGC CCCTGCTCGC CCTGCTGGCC CTGGCCTTCA CGACCTACCC GTCGCTCGGC GAGGGCGAGC GGATCGACCT GGCCGTTCCG GGCGTCCTCG CCCTGGCCAT CATGTCCACG GCCTTCACCG GTCAGGCGAT CTCATTGGCC TTCGACCGCC GCTACGGGGT GCTGCGTCTC TTCGGCACGA CCCCTTTGGG CACCAGTGGC CTCGTCGCCG GCCGGGTGCT GGCCGTGCTG GCCGTGATCA CCCTGCAGGT GGTGGTGCTC GGCGCGGTGG GCCTGCTGCT GGGCTGGCGG CCGGAGCTCG TCGGCATGGC GCCGGCGCTG GCGGTGGGGG TCCTGGGCGC CGCTGCGTTC GTGGTGCTGG CCGTCCTCGT GGGCGGTCGG CTGCGGGCCG AGGCGGTGCT GGCGGTGGCC AACCTGCTGT GGGTGGTCTT CCTCGCCCTG GGCAGCCTGT TGCCCAGCGA GCGGTTCGGT GAGCCCTGGG CGCAGCTGGT GCGGCTCACC CCATCGGGCG CCCTGGGTGA CGGCCTGCGG GCGGCGCTGG CCCACGGGCA GTGGGACCTC GGCGCCCTGG CGGTGCTGGC CGCGTGGGCG GTACTCGGCG GCCTTCTGGC CACGCGCGTC TTCCGCTGGT CGGACTGA
|
Protein sequence | MSTSPTQRVL AQGRYETGVL LRNGEQLLVS LALPLLALLA LAFTTYPSLG EGERIDLAVP GVLALAIMST AFTGQAISLA FDRRYGVLRL FGTTPLGTSG LVAGRVLAVL AVITLQVVVL GAVGLLLGWR PELVGMAPAL AVGVLGAAAF VVLAVLVGGR LRAEAVLAVA NLLWVVFLAL GSLLPSERFG EPWAQLVRLT PSGALGDGLR AALAHGQWDL GALAVLAAWA VLGGLLATRV FRWSD
|
| |