| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_13250 |
|---|
| Symbol | |
|---|
| ID | 8372833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1377113 |
|---|
| End bp | 1377817 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644991601 |
|---|
| Product | ABC-type multidrug transport system, ATPase component |
|---|
| Protein accession | YP_003149120 |
|---|
| Protein GI | 256825160 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.451187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGAGC TCGAGGTGGA ACGGGCCACG ATTCACTATG GCAAGCGGAC CGCCGTCGAG
GAGGTCTCGT GGCGGCGAGG CTACGGCCTG CATGGGCTGC TCGGGGCAAA CGGCGCCGGC
AAGACGTCCC TGATGCGTGC CGTCGTGACC TTGCAGCCCC TCGATGGGGG CAGCATCATG
CTGGGTGGTG CACCGGTTCG TCAGGTTCGG GAGCGCGTGG GCTTCCTGCC GCAGGACAAC
CTTCGCCGAT CGCGGTTCAC GGTGCGAGAG CACTTGGCCT ACATGTGTTG GCTCAAGCGT
TTGGACGATC AGGCCACCAC CTCGGAGGTC GACCGTCTGT TGAGACTCGT GGACCTCGAG
ACGCGTGCCG ACGATCGCAT CAGGGCACTG TCAGGGGGGA TGCGTCGAAG AGTCGGGGTC
GCCTCGGCGC TGGTCGCCAG TCCCGAGCTC ATCGTGCTCG ACGAGCCAAC AGCCGGCCTC
GACATGGCGC AGCGGGACTC TCTCAACGAG CTGCTGCACC AGGTCTCGCA AAATGCGATC
GTCGTCATCT CGACACACAT CGTCGAGGAC GTCCTCGACC ACGCGGACAC CATCACAGTC
ATGAACCAGG GCTCGTTCGT CTTCGACGGG ACATTCGACA GGTTCAGCCC CACCCGGGAG
CTCTCGACTG TGCGCGCCGC CTACCTCGAA CTGGTTGCGC AGTGA
|
|---|
| Protein sequence | MTELEVERAT IHYGKRTAVE EVSWRRGYGL HGLLGANGAG KTSLMRAVVT LQPLDGGSIM
LGGAPVRQVR ERVGFLPQDN LRRSRFTVRE HLAYMCWLKR LDDQATTSEV DRLLRLVDLE
TRADDRIRAL SGGMRRRVGV ASALVASPEL IVLDEPTAGL DMAQRDSLNE LLHQVSQNAI
VVISTHIVED VLDHADTITV MNQGSFVFDG TFDRFSPTRE LSTVRAAYLE LVAQ
|
|---|
| |