Gene Ksed_12900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12900 
Symbol 
ID8372798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1331954 
End bp1332832 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content76% 
IMG OID644991567 
Producttryptophan synthase, alpha chain 
Protein accessionYP_003149087 
Protein GI256825127 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0159] Tryptophan synthase alpha chain 
TIGRFAM ID[TIGR00262] tryptophan synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0777169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0541749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG CACTGGAGTC CCGCTTCGCG CAGGTGGCCG ATGAGGGGCG CTCCGCCCTG 
GTGGTCTACC TCCCCGTCGG CTTCCCGGAC GTCCGCACCT CCTGCGCGGC CATGGTGGCC
GCCGTGGAGG CCGGCGCGGA CGTCATCGAG ATCGGCATCC CGTACACCGA CCCGGTCATG
GACGGCCCGG TCATCCAGAA CGCCGCCGAC CGGGCCCTCG AGCACGGTGC CGGGGTCCCC
GACGCGCTGG AGTGCGCGCG CGCCGTGGCG GCCGCCGGTG GCGTGCCGGT GGTGATGAGC
TACTGGAACC CGCTGCTGGC CCACGGGGTC GAGGCGCTGG CCGCCGAGCT CGCCGAGGCG
GGCGCGGCCG GCGTGATCCT GCCGGACCTG CCCCCGGAGG CAGCCGGGGC GTGGCACCGC
GCGGCGGACG CGCACGACCT CTCGACCGTG CACCTGGTCG CCCCGAGCAC GACGCCGGAG
CGAGTCGCCC GCATCACCGC GGCCTCCAGC GGGTTCGTGT ACGCCGCCAG CACGATGGGG
GTGACCGGCG CCCGGGCCTC GGTCTCGGAC GTCGCCGCCG AGGTGGTGGC CCGGGTGCGC
GCGACCACCG ACCTCCCCGT CGCCCTGGGG CTGGGCGTGT CCTCCGGCGA GCAGGCCCGC
CAGGTGACAG CCTTCGCCGA CGGGGTGATC GTCGGCTCGG CCCTCGTCAC CGCGCTCGCC
CGTGACTGTG GGGTGGACCT CGGCGCCGCA CCGGCCGCCG ACCCGGCCGC GCCCGAGTCC
GTGGCACCAT CTGCTCCCAG CGGACCCTCA GGTTCTGCGG CTAACTTCCC GCGCATGACG
GCACTGGTGC AGGAGATCGC CGGCGCCCTC GACGACTGA
 
Protein sequence
MSNALESRFA QVADEGRSAL VVYLPVGFPD VRTSCAAMVA AVEAGADVIE IGIPYTDPVM 
DGPVIQNAAD RALEHGAGVP DALECARAVA AAGGVPVVMS YWNPLLAHGV EALAAELAEA
GAAGVILPDL PPEAAGAWHR AADAHDLSTV HLVAPSTTPE RVARITAASS GFVYAASTMG
VTGARASVSD VAAEVVARVR ATTDLPVALG LGVSSGEQAR QVTAFADGVI VGSALVTALA
RDCGVDLGAA PAADPAAPES VAPSAPSGPS GSAANFPRMT ALVQEIAGAL DD