Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_12900 |
Symbol | |
ID | 8372798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1331954 |
End bp | 1332832 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644991567 |
Product | tryptophan synthase, alpha chain |
Protein accession | YP_003149087 |
Protein GI | 256825127 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.0777169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0541749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAACG CACTGGAGTC CCGCTTCGCG CAGGTGGCCG ATGAGGGGCG CTCCGCCCTG GTGGTCTACC TCCCCGTCGG CTTCCCGGAC GTCCGCACCT CCTGCGCGGC CATGGTGGCC GCCGTGGAGG CCGGCGCGGA CGTCATCGAG ATCGGCATCC CGTACACCGA CCCGGTCATG GACGGCCCGG TCATCCAGAA CGCCGCCGAC CGGGCCCTCG AGCACGGTGC CGGGGTCCCC GACGCGCTGG AGTGCGCGCG CGCCGTGGCG GCCGCCGGTG GCGTGCCGGT GGTGATGAGC TACTGGAACC CGCTGCTGGC CCACGGGGTC GAGGCGCTGG CCGCCGAGCT CGCCGAGGCG GGCGCGGCCG GCGTGATCCT GCCGGACCTG CCCCCGGAGG CAGCCGGGGC GTGGCACCGC GCGGCGGACG CGCACGACCT CTCGACCGTG CACCTGGTCG CCCCGAGCAC GACGCCGGAG CGAGTCGCCC GCATCACCGC GGCCTCCAGC GGGTTCGTGT ACGCCGCCAG CACGATGGGG GTGACCGGCG CCCGGGCCTC GGTCTCGGAC GTCGCCGCCG AGGTGGTGGC CCGGGTGCGC GCGACCACCG ACCTCCCCGT CGCCCTGGGG CTGGGCGTGT CCTCCGGCGA GCAGGCCCGC CAGGTGACAG CCTTCGCCGA CGGGGTGATC GTCGGCTCGG CCCTCGTCAC CGCGCTCGCC CGTGACTGTG GGGTGGACCT CGGCGCCGCA CCGGCCGCCG ACCCGGCCGC GCCCGAGTCC GTGGCACCAT CTGCTCCCAG CGGACCCTCA GGTTCTGCGG CTAACTTCCC GCGCATGACG GCACTGGTGC AGGAGATCGC CGGCGCCCTC GACGACTGA
|
Protein sequence | MSNALESRFA QVADEGRSAL VVYLPVGFPD VRTSCAAMVA AVEAGADVIE IGIPYTDPVM DGPVIQNAAD RALEHGAGVP DALECARAVA AAGGVPVVMS YWNPLLAHGV EALAAELAEA GAAGVILPDL PPEAAGAWHR AADAHDLSTV HLVAPSTTPE RVARITAASS GFVYAASTMG VTGARASVSD VAAEVVARVR ATTDLPVALG LGVSSGEQAR QVTAFADGVI VGSALVTALA RDCGVDLGAA PAADPAAPES VAPSAPSGPS GSAANFPRMT ALVQEIAGAL DD
|
| |