Gene Ksed_12600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12600 
Symbol 
ID8372768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1298631 
End bp1299545 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content63% 
IMG OID644991537 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_003149057 
Protein GI256825097 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.549208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.205844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCGGC GATTGCTCCA GATGATCCCC GTGTTCATCC TGGCGACATT GCTGCTGTAC 
GCCATGGTCT ACGGACTTCC AGGCGACGCC GCTGCCGCAC TGTGTGGCGA CCGTGCCTGT
GACCCGGCGT TCGTCCAGAG GTTCAACGAG GAGTACCACC TCGACGAGCC GTTGCTCGTG
CAGTACGGCT ACTACCTGCA GGGCATCGTG ACCCTGGACT TCGGTGAGAC CTTCACCGGC
CGCCCCGTCA TCGAGGTCAT GAAGGAGACC TTCCCGGTCA CCATCAAGCT GGCGATGATC
GCCTGGGCCT TCGAGGTCCT CATCGGCATC CCGATCGGTC TGATCGCCGG TCTGAACCAC
GGCACCTTCC TGGACACCGC GGCCCTGCTG CTGACCCTGT TGGTCATCTC GATCCCCGTG
TTCGTCCTGG GCTTCCTGGC CCAGTTCTTC CTCGGTCTGC GCTGGGAGAT CTTCGAGCCC
ACGGTGGGTG GAGACGCCTC GTGGTCCGCC CTGTTGTTGC CCGGCATCGT CCTCGCAGCG
CTCTCGGTTG CGTACATCAC GCGACTCATG CGCACCTCGA TCGTCGAGAA CAAGGGTTCC
GACTACGTCA AGACCGCGCT GGCCAAGGGT CTGCCGAAGC ACCGCATCAT CGGCGTGCAC
CTGTTGCGCA ACTCCCTCAT CCCGGTCGTG ACCTTCCTGG GCACCGACCT GGGTGCGCTC
ATGGGTGGCG CCATCGTCAC CGAGGGCATC TTCAACGTCC CGGGCGTCGG TAACCAGATC
TTCCGCGCTA TCAACGCCGG CGAGAACGCC ACGGTGGTCT CGTTCGTGAC GGTGCTGATC
TTCGTGTACC TCATCGCGAA CCTGATCGTG GACCTGCTCT ACGCCGTGCT CGACCCGAGG
ATCCGCCTTG ACTGA
 
Protein sequence
MLRRLLQMIP VFILATLLLY AMVYGLPGDA AAALCGDRAC DPAFVQRFNE EYHLDEPLLV 
QYGYYLQGIV TLDFGETFTG RPVIEVMKET FPVTIKLAMI AWAFEVLIGI PIGLIAGLNH
GTFLDTAALL LTLLVISIPV FVLGFLAQFF LGLRWEIFEP TVGGDASWSA LLLPGIVLAA
LSVAYITRLM RTSIVENKGS DYVKTALAKG LPKHRIIGVH LLRNSLIPVV TFLGTDLGAL
MGGAIVTEGI FNVPGVGNQI FRAINAGENA TVVSFVTVLI FVYLIANLIV DLLYAVLDPR
IRLD