Gene Ksed_12420 details

Gene Information

• Locus tag: Ksed_12420
• Symbol: aspS
• ID: 8372750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Kytococcus sedentarius DSM 20547
• Kingdom: Bacteria
• Replicon accession: NC_013169
• Strand: +
• Start bp: 1275941
• End bp: 1277773
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644991519
• Product: aspartyl-tRNA synthetase
• Protein accession: YP_003149039
• Protein GI: 256825079
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0173] Aspartyl-tRNA synthetase
• TIGRFAM ID: [TIGR00459] aspartyl-tRNA synthetase, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.0974797
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.322383
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTCCGTA CCCACGAAGC CGGCACCCTG CGTGCCGAGC ACGCCGGCCA GACCGTCACC 
CTCACCGGAT GGGTGGCCCG CCGCCGCGAC CACGGCGGTG TTGCCTTCCT CGACCTGCGG 
GACGCCTCCG GCGTCGCCCA GGTGGTGGCC CGCGACGAGG TCCTCGAGTC CGGCGGCGCC 
CACGACCTGC GCAACGAGTA CGTCGTGAAG ATCGTCGGCG AGGTGCGCGT GCGCCCCGAG 
GGCAACGTGA ACTCCGAGCT CCCCACCGGT GAGATCGAGG TGGTGGCCGC CGAGCTCGAG 
GTGCTCAACA CCGCCGCCCC GCTGCCCTTC CAGATCGACG AGCGCGTCGA GGTGGGAGAG 
GAGGCCCGCC TCAAGCACCG CTACCTGGAC CTGCGCCGCC CCGGCAAGGG CTCGGCCGGC 
GAGGCGCTGC GGTTGCGCAG CAAGGCCAAT GCCGCTGCCC GCCGCGTGCT GGAGGAGCAC 
GCGTTCGTGG AGGTGGAGAC GCCCACCCTG ACGCGCTCCA CGCCCGAGGG CGCCCGCGAC 
TTCCTGGTGC CGGCCCGCCT GGCCCCCGGC AAGTGGTACG CCCTGCCGCA GAGCCCCCAG 
TTGTTCAAGC AGCTGCTGAT GGTGGCCGGT CTGGAGCGCT ACTACCAGAT CGCCCGCTGC 
TATCGGGACG AGGACTTCCG CGCCGACCGC CAGCCGGAGT TCACCCAGCT CGACATCGAG 
ATGAGCTTCG TCACCCAGGA GGACGTGATC GCCCTGGGTG AGGAGATCGC CCGCGCGCTG 
TGGGCCCTCA TCGGCGTGGA CGTGCCCGCG CCCTTCCCCC GCATCACCTA CACCGAGGCG 
ATGGAGAAGT ACGGCTCGGA CAAGCCGGAC CTGCGCTTCG ACCTGGAGCT CACCGACTGC 
ACGGAGTTCT TCGCCGAGAC GCCCTTCCGC GTCTTCCAGG CGCCCTACGT CGGCGCCGTG 
GTCATGCCCG GCGGCGCCAG CCAGCCACGC AAGCAGCTCG ACGCCTGGCA GGAGTGGGCC 
AAGCAGCGCG GCGCCAAGGG CCTGGCCTAC GTCCTGGTGG GCGAGGACGG TGAGCTGTCC 
GGCCCGGTGA GCAAGAACAT CTCCGATGCG GAGAAGGCCG GCATCGCGGC CCACACCGGT 
GCGCAGCCCG GTGACTGCAT CTTCTTCGCC GCCGGCCCCG CCAAGGCCGC CCGCGGCCTG 
CTCGGCGCGG CCCGGCTGGA GATCGGCCAC CGGTGCGGCC TCATCGACCA GGACGCTTGG 
TCCTTCCTGT GGGTCGTGGA CGCCCCGCTG TTCGAGCCCG CGGCCGACGC CGTCGCCTCC 
GGCGACGTGG CCGTGGGGGA GGGCGCGTGG ACCGCGGTCC ACCACGCCTT CACCTCGCCG 
AGGGACGAGT GGCTGGACTC CTTCGAGGAG AAGCCCGGCG AGGCCCTGGC CTACGCCTAC 
GACATGGTCT GCAACGGCAA CGAGATCGGT GGCGGCTCCA TCCGTGTGCA CCGTCGCGAC 
GTGCAGGAGC GGATCTTCAA GGTCATGGGC CTGAGCGAGG AGGAGGCCCA GGAGAAGTTC 
GGCTTCCTGC TGGAGGCCTT CTCGTACGGC GCCCCGCCGC ACGGCGGCAT CGCCTTCGGG 
TGGGACCGCA TCGTCGCCCT GCTCTCGGGC TCGGACTCGA TCCGCAACGT CATCGCCTTC 
CCGAAGTCCG GTGGCGGCTA CGACCCGCTG ACCGATGCCC CGGCGCCCAT CTCCGCGCAG 
CAGCGCGAGG AGGCCGGGGT GGACCACCAG CCCGAGGAGG AGGAGTCCTC CGCCGAGCAG 
GGGGCCGAGC AGGTCAACCC GGTCACCAGC TGA 

 

Protein sequence

MLRTHEAGTL RAEHAGQTVT LTGWVARRRD HGGVAFLDLR DASGVAQVVA RDEVLESGGA 
HDLRNEYVVK IVGEVRVRPE GNVNSELPTG EIEVVAAELE VLNTAAPLPF QIDERVEVGE 
EARLKHRYLD LRRPGKGSAG EALRLRSKAN AAARRVLEEH AFVEVETPTL TRSTPEGARD 
FLVPARLAPG KWYALPQSPQ LFKQLLMVAG LERYYQIARC YRDEDFRADR QPEFTQLDIE 
MSFVTQEDVI ALGEEIARAL WALIGVDVPA PFPRITYTEA MEKYGSDKPD LRFDLELTDC 
TEFFAETPFR VFQAPYVGAV VMPGGASQPR KQLDAWQEWA KQRGAKGLAY VLVGEDGELS 
GPVSKNISDA EKAGIAAHTG AQPGDCIFFA AGPAKAARGL LGAARLEIGH RCGLIDQDAW 
SFLWVVDAPL FEPAADAVAS GDVAVGEGAW TAVHHAFTSP RDEWLDSFEE KPGEALAYAY 
DMVCNGNEIG GGSIRVHRRD VQERIFKVMG LSEEEAQEKF GFLLEAFSYG APPHGGIAFG 
WDRIVALLSG SDSIRNVIAF PKSGGGYDPL TDAPAPISAQ QREEAGVDHQ PEEEESSAEQ 
GAEQVNPVTS