Gene Ksed_12140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12140 
Symbol 
ID8372722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1239374 
End bp1239844 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content74% 
IMG OID644991491 
Productputative calcium-binding protein 
Protein accessionYP_003149014 
Protein GI256825054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.00153272 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0976113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGC TCCTGCTGAC GGTCGCCGGA AGCGCCTTCC TGGCCACCGG CCTCGTCGCC 
CCTGCCCAGG CCGCCACCCC GGACTTCGCC AACTGCACCG AGGCGAACGA GGCGGGTTAC
TACAACATCC CGGCCAGCAG CCCGGTCTAC AAGAAGAAGT TCGACCGCGA TGGTGACGGC
GTCGGCTGCG ACCACCCGGA CCCCACCAAG CGCGGCACCT ACATCCACCC CGAGACCGCG
CCTGCCCCCA AGCCGGCCCC GGAGCCCGCT CCCGCCCCGA AGCCCGCGCC CAAGCCGGCT
CCGAAGCCCG TCGAGGAGAC CCCGGCCCCC GCGCCGGACG TCGAGGGCCC GACCGCTGAG
ACCGGGTACG CCGCCACGGA CAACACCGGC GTGGCCCTGG TCGGCGGCGC TGCCCTGCTC
CTCGCCGGCG GTGCCGTGAC CGTCGCAGGT GCACGCAGCA CGCGTCGCTG A
 
Protein sequence
MRKLLLTVAG SAFLATGLVA PAQAATPDFA NCTEANEAGY YNIPASSPVY KKKFDRDGDG 
VGCDHPDPTK RGTYIHPETA PAPKPAPEPA PAPKPAPKPA PKPVEETPAP APDVEGPTAE
TGYAATDNTG VALVGGAALL LAGGAVTVAG ARSTRR