| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_12040 |
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| Symbol | |
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| ID | 8372712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 1228477 |
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| End bp | 1229658 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644991482 |
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| Product | transcriptional regulator, CdaR family |
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| Protein accession | YP_003149006 |
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| Protein GI | 256825046 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.0292097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.187885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGACC GGACCCTCGC CCAGCTGCGC GCCCAGGTCT CGGAACTCAC CCACCAGGCA
CTGCTGCAGA TGGAGCGACA CGAGTGGTAC CGCGAGCTCT CCGCGGAGCA CCGGTCGGGG
GTGGCGCTGG TGGCCGAGGC CGGCATCCGT GCCTTCGGCG AGTGGCTCTC CGGACGGGGC
GAGCCCGGCC GGGCCACCCT CGTCTTCGCC GACGCCCCCC GCGAGCTCAG CACGGCCCTG
AGTCTGGAGC AGACCATCGA GCTGGTCCGG GTGACGGTGC ACACCGTCGA GGAGTCCGTG
GAGGACCTCG CGCACGACCC CTCCGAGCGG GACCGGTTGC TGGTGGCCTG CCTGCGCTTC
AGCCGAGACA TCGCCTTCGG TGCCGCCACG GTGTATGCGC GCGCCGCCGA GGCCCGCGGC
TCTTGGGACT CCCGGCTGGA GTCGCTCGTG GTCGACGCCG TCCTGCGGGG CGAGGCCACC
GAGGACATCC ACTCCCGGGC CGCGGCACTC GGCTGGGGGC AGGCGCAGGG GGTCGCCGTC
GCGGTGGGCA CCAGCAGCGA CCTCACCGAC GAGGCGGAGC TCGTCCGGCA GGTCCGCAGC
GCCTGTCGCC GCCACGGCCG GGAGGCCCTG GTCACCATCA ACTCCGGGCG TGTGGTGGTG
GTCCTCTCCG GCCTCGACGA CGCCGAGGAC GCGTTCGCGC CACTGACCGC CGCCCTGGAC
GAGAGCCCGG TGGTGGTCGG GCCGGTCGTG CCCCACCTCT TCGCCGCCGG CCGCTCAGCC
CGGGCCGCCC TGGCCGGGTG GAACGCCTCA CGCGCCTGGC CCGACGCCCC GGCCGCAGTG
CGCTCGAGCG AGCTGCTCCC CGAGCGGGTC CTGGCCGGTG ACGACTCGGC CCGCCGCGAG
CTCACCAAGC TGGTGGTCCG CCCCTTGGAG GAGGCCGGCC GCGACCTGCT CGCCACCGCC
GAGACGATGC TGACGCAGGG TGGCGCGCTC GAGGCCAGCG CCCGGGCACT GTTCGTCCAC
GTCAACACGG TGCGCTACCG GCTCGCCCGC ATCGAGGAGG TCGTGGGGCT CGACCTCACC
GACCCGCGGG ACGCCTGGAC GCTCCGGGTG GCGCTGGCGG TGCACCGCAT CGACGCCCCG
CGGGTTCCCC AGTGGAGGCG GTCGGTGCAG GGAGACGCCT GA
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| Protein sequence | MDDRTLAQLR AQVSELTHQA LLQMERHEWY RELSAEHRSG VALVAEAGIR AFGEWLSGRG
EPGRATLVFA DAPRELSTAL SLEQTIELVR VTVHTVEESV EDLAHDPSER DRLLVACLRF
SRDIAFGAAT VYARAAEARG SWDSRLESLV VDAVLRGEAT EDIHSRAAAL GWGQAQGVAV
AVGTSSDLTD EAELVRQVRS ACRRHGREAL VTINSGRVVV VLSGLDDAED AFAPLTAALD
ESPVVVGPVV PHLFAAGRSA RAALAGWNAS RAWPDAPAAV RSSELLPERV LAGDDSARRE
LTKLVVRPLE EAGRDLLATA ETMLTQGGAL EASARALFVH VNTVRYRLAR IEEVVGLDLT
DPRDAWTLRV ALAVHRIDAP RVPQWRRSVQ GDA
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