Gene Ksed_11790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11790 
Symbol 
ID8372687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1206107 
End bp1206901 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID644991457 
ProductUndecaprenyl pyrophosphate synthetase 
Protein accessionYP_003148983 
Protein GI256825023 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0184207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACG CCGACCCCTA CCCCCACCCC TCGGGGGCCC GCCCGCCCGC GCTGGCCCCG 
CAGGAGCTGC CGCAGCACGT GGCGGTGGTG ATGGACGGCA ACGGTCGCTG GGCCAACGAG
CGCGGGTTGC CGAGGACCGC GGGCCACGAG GCGGGGGAGG CCGCGCTGCT GGACGTGGTG
GCCGGGGCGA TCGAGGCCGG CGTGCCGAAC CTGTCGGCCT ACGCGTTCTC CACCGAGAAC
TGGCGTCGGT CGCCCGAGGA GGTGCGTTTC CTGATGGGCT TCAACCGTGC GGTGATCCGC
CGCCGGCGAG ACCAGCTGAA CGCCTGGGGG GTGCGGATGC GGTGGATCGG CCGCCGCCCG
CGGCTGTGGC GTGGGGTCAT CAAGGAGCTC GAGGCCGCCG AGCAGATGAC CCGTGACAAC
GACCGGCTCA CCCTGTACTT CTGCGTGAAC TACGGTGGGC GGGCCGAGCT CGTCGACGGG
GTGCGTTCGA TCGCGCAGGA GGTGGCGGCC GGTCGGCTGA CCCCTGGCGG CATCACCGCA
GCCACCATCA CCAAGCACCT CTACGACCCC CGGATGCCGG ACGTCGACCT GTTCCTGCGC
AGTTCGGGCG AGCACCGCAC CAGCAACTTC CTGCTGTGGC AGAGCGCCTA CGCAGAGCTG
GACTTCCCCG AGACCCTCTG GCCGGACTTC GACCGCCGCC ACCTGTGGGC CGCGCTGGAG
CGCTACGCCG GGCGGGACCG CCGGTTCGGG GGAGCGGTCG ACCGCCCTCA GGAGCAGTCG
GAGCAGCGTC CGTAG
 
Protein sequence
MSHADPYPHP SGARPPALAP QELPQHVAVV MDGNGRWANE RGLPRTAGHE AGEAALLDVV 
AGAIEAGVPN LSAYAFSTEN WRRSPEEVRF LMGFNRAVIR RRRDQLNAWG VRMRWIGRRP
RLWRGVIKEL EAAEQMTRDN DRLTLYFCVN YGGRAELVDG VRSIAQEVAA GRLTPGGITA
ATITKHLYDP RMPDVDLFLR SSGEHRTSNF LLWQSAYAEL DFPETLWPDF DRRHLWAALE
RYAGRDRRFG GAVDRPQEQS EQRP