Gene Ksed_11120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11120 
Symbol 
ID8372620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1136729 
End bp1137487 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content77% 
IMG OID644991390 
Productribonuclease HII 
Protein accessionYP_003148917 
Protein GI256824957 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0695158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.170747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGGC GCGCCACGGC GCGGGCGGCA CGGAACCGCA CGACCACCAC CACCCCCACG 
CTCCGGGTCG AGCGGGAGCT GCTGCGTCAG GGTGCGCGCC GGGTGGCCGG CATGGACGAG
GTGGGGCGCG GTGCGCTGGC CGGCCCCGTC AGCGTGGGGG TCGTCGTGGT CGACGCGGCG
GTCGGCACCG CCCCGGTGGG CGTGCGGGAC TCCAAGGACC TCTCGGCCGC CCGTCGGGAG
GGCCTCGTGC CGCAGCTGTC CCGATGGGGT GTGGCCCGGG GCGTGGGGCA CGCCGGGCCC
GAGGAGATCG ATGCCCACGG CATCATGGCC GCGCTGCGGA TGGCGGGGCG TCGCGCGCTG
GCGGCCGCGG GGGTCGAGGT GGACGTCGTG CTGCTGGACG GCAACCACGA CTGGTTGACC
GACCCCCTGC GCAGCGGGCT GTTCGGGCTG CAGGGCGTGG CCGGCCCGGC GGTGGTCACC
CGCACCAAGG CCGACCGCAC GTGCTCGTCG GTGGCCGCGG CCAGCGTGCT CGCCAAGGTG
GAGCGCGACG GCATCATGAC CGACCTGGCG GGGGCGCCCG GGTGCGCTGC CTACGGCTGG
GAACGCAACA AGGGCTACGC CGCCGGCGAC CACCGGGCGG CCCTGGGGAG CCTCGGGCCG
AGCGTGCACC ACCGGCGTTC CTGGCGCCTG GGGGTGGGGG ATGATGGGAC CTCTGCGGCG
TCCGTGCCGT GGGACGAGCG CCACCGGGAG GTGTCATGA
 
Protein sequence
MSRRATARAA RNRTTTTTPT LRVERELLRQ GARRVAGMDE VGRGALAGPV SVGVVVVDAA 
VGTAPVGVRD SKDLSAARRE GLVPQLSRWG VARGVGHAGP EEIDAHGIMA ALRMAGRRAL
AAAGVEVDVV LLDGNHDWLT DPLRSGLFGL QGVAGPAVVT RTKADRTCSS VAAASVLAKV
ERDGIMTDLA GAPGCAAYGW ERNKGYAAGD HRAALGSLGP SVHHRRSWRL GVGDDGTSAA
SVPWDERHRE VS