| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_10980 |
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| Symbol | |
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| ID | 8372606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 1123097 |
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| End bp | 1124911 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644991376 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_003148903 |
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| Protein GI | 256824943 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.160469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0249025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAACA GCCTCTCCGA CCGCCTGACC CTCACCTTCG GCAACCTGAA GCGCAAGGGC
AAGCTCACCG AGTCCGACGT CAATGCGACC GTCCGCGACA TCCGGTTGGC CCTGCTCGAT
GCCGACGTGG CCCTGCCGGT GGTGAAGCAG TTCACCAGTG TCGTGCGCGA GCGCGCGACC
GGCGCCGAGG TCTCCCAGGC GCTGAACCCC GCCCAGCAGG TCGTGAAGAT CGTCAACGAG
GAGCTCGTCG ACATCCTCGG TGGCGAGACC CGCACCATCC GCTTCGCCAA GCGCCCGCCG
ACCGTGATCA TGCTCGCGGG TCTGCAGGGT GCGGGTAAGA CGACCCTCGC AGGCAAGCTC
GGTCACTGGC TGAAGCAGCA GGGCCACACC CCGCTGCTCG TGGCCTGTGA CCTGCAGCGC
CCGAACGCCG TGAACCAGCT GCAGGTGGTG GGGGAGCGGG CCGGGGTGCC GGTCTACGCC
CCGGAGAAGG GCAACGTCTT CGGCCACGAC GCCGCGTTGG ACACCGGCGA GGGCACCCGT
TCCTTCGGCG ACCCGGTCGA GGTCGCCCGT CGCGGTGTGG CCCAGGGACA GGCTCGCCAG
CACGACGTGG TCATCATCGA CACCGCCGGC CGCCTGGCCG TGGACGAGAA CCTGATGCAG
CAGGCCGCTG ACATCCGCGC CGCGGTGAAC CCCGAGGAGG TGCTGTTCGT CATCGACGCG
ATGATCGGAC AGGCCGCCAT CGACACCGCC ATGGCCTTCG ACGAGGGCGT GAACTTCACC
GGAGTGGTGC TCTCGAAGCT CGACGGTGAC GCCCGCGGTG GTGCCGCGCT GTCGGTGGCC
TCGGTCACCG GCAAGCCGGT GATGTTCGCC TCTACCGGTG AGCAGGTGAA GGACTTCGAG
GTCTTCCACC CCGACCGCAT GGCCAGCCGC ATCCTCGACA TGGGTGACGT GCTCACCCTC
ATCGAGCAGG CTGAGCAGGC CTTCGACCGC TCGCAGGCCG CGGAGATGTC GCGGAAGTTC
ATGTCCGACG AGGACTTCAC CTTCGACGAC TTCCTCGAGC AGATGTCCGC CATCAAGAAG
ATGGGCAACC TCAAGCAGCT GCTGGGGATG ATGCCGGGCA TGGGCCAGAT GCGGGCCCAG
ATCGAGGCGC TGGACGAGAA GGAGTTCGAC CGCGTCGAGG CGATGGTGCG CTCCATGACG
CCCTTCGAGC GCAACCACCC CAAGCAGATC AACGGTTCCC GCCGCGCCCG CATCGCCAAG
GGTGCCGGGA CGACCGTCTC CGAGGTCAAC CAGCTGCTCG AGCGCTTCGG CGCCGCCCAG
AAGATGATGA AGCAGTTCAA GAAGGGCGGC GGCATGCCCG GCATGCCCCC GGGGATGGCC
GGCATGCCGG GGATGCCCGG CCCCGGCGGG GCCGGTGGCG CCAAGGGCAA GAAGGGCAAG
AACCAGCGGT CCAAGGCCAA GTCGGGCAAC CCGGCCAAGC GCGCCCAGCA GGAGGCCGCG
GAGGCACGGA AGGCCGAGGA GGCACAGCAG CGCCGCTTGG ACGAGATGTT CGGGGGCGGC
GAGGAGCCCC AGGCACCCAA GAAGAAGTCC GCCTTCGGCG GCCTCGACGC GCTGGCCGGC
GGCCACGGCG GGGGACAGGG CTCCTCCGGC GGCGACGCGG GCGCCGGCGG ACACGGGCTG
CCCGGCGGCG GCCACCCGGG CGCGAAGGGA TCGGGCGCCG GGGCGAAGGA TGCCGACGAC
CAGGGCCTGG GGGACCTCCA GCTGCCCAAG GGCTTCGAGA AGTTCCTCGG CGGCGGCGGC
CACGGCAAGG GCTGA
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| Protein sequence | MFNSLSDRLT LTFGNLKRKG KLTESDVNAT VRDIRLALLD ADVALPVVKQ FTSVVRERAT
GAEVSQALNP AQQVVKIVNE ELVDILGGET RTIRFAKRPP TVIMLAGLQG AGKTTLAGKL
GHWLKQQGHT PLLVACDLQR PNAVNQLQVV GERAGVPVYA PEKGNVFGHD AALDTGEGTR
SFGDPVEVAR RGVAQGQARQ HDVVIIDTAG RLAVDENLMQ QAADIRAAVN PEEVLFVIDA
MIGQAAIDTA MAFDEGVNFT GVVLSKLDGD ARGGAALSVA SVTGKPVMFA STGEQVKDFE
VFHPDRMASR ILDMGDVLTL IEQAEQAFDR SQAAEMSRKF MSDEDFTFDD FLEQMSAIKK
MGNLKQLLGM MPGMGQMRAQ IEALDEKEFD RVEAMVRSMT PFERNHPKQI NGSRRARIAK
GAGTTVSEVN QLLERFGAAQ KMMKQFKKGG GMPGMPPGMA GMPGMPGPGG AGGAKGKKGK
NQRSKAKSGN PAKRAQQEAA EARKAEEAQQ RRLDEMFGGG EEPQAPKKKS AFGGLDALAG
GHGGGQGSSG GDAGAGGHGL PGGGHPGAKG SGAGAKDADD QGLGDLQLPK GFEKFLGGGG
HGKG
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