Gene Ksed_10960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_10960 
Symbol 
ID8372604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1120877 
End bp1122319 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content73% 
IMG OID644991374 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_003148901 
Protein GI256824941 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0134963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0668977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGAAT TCCTCGACAC CCTGACCGAA CAGCTCGTCG CCGGCGGCCT GACGCTGGGC 
CTCTTGGGCG GCGGCACCTG GGCTTGGCTG CGGGCGAAGG CCGGCGGCGG CAGCTCCACC
ACCGAGGCCC CGCCCGAGCA GGAGCCGCGC ACCACGACGC GGCCCCCCAT CGAGCACACG
CCGGCGAAGA AGTCGACCTA TGGCGAGCGC ACCAAGGGCG CCACCATGGA CTTCAACCGG
CGCACCGAGC CGTCGGACAC CACGACGGCC GGCCCGGGGG TCGACAAGCC CACCACGGGG
GAGGGTCCCA CCCACCTCAA GGAGCGCCAC ACCATCCCGC CGATGCCGGT GGGTGGCGAC
ACCGACGTCG CCGAGCGTCC CGACGTGGCC GAGCGGCCGG AGCCGGCCGA TCGTGTCGAT
GCGCCGGCGC CGGGCTCGGC GACCGCACCC ACCACCCCTC GCGATGAGGA CCGGGCCGAG
GCCGATGCGG CGGACGCACC CACCACCGTC GAGGCGCCCC CGAGCGCGGA CGGCCGACTG
GTCCGCCTGC GGGCACGCCT CTCTCGCTCC AACAACGCGG TCGGCCAGGC GCTGCTGAAG
CTGCTGACCT CCGGTGACCT CGACGAGGCC GCCTGGGAGG AGGTCGAGGA CACCCTGCTG
GCCAGCGACC TCGGCGTGGA GGCCACCACC GAGCTGGTGG ACAACCTCCG CAAGCGGGTG
CAGGTGGAGA ACACCACCGA CCCCGAACTG GTCCGCGGCT GGTTGCGCGA GGAGCTGGTG
CGCCTGGTGG ACCCGACGAT GGAGCGCGGC ATCGCCGCCA CCCGTCAGAA CGGCCGACCC
TCGGTGGTGC TGGTCGTCGG CGTGAACGGC ACCGGCAAGA CCACCACCGT CGGCAAGATC
GCCCGCGTGT TGGTGGCCGA GGACAAGGAC GTCGTGCTCG GTGCGGCGGA CACCTTCCGT
GCGGCGGCGG CCGACCAGCT GCAGACCTGG GGCGAGCGCG TGGGCGTGCG CACGGTGCGC
AGCGAGAAGG AGGGGGCGGA CCCCGCATCG GTGGCCTTCG ACGCGGTGCG CGAGGGGCTG
GAGTCCGAGG CCGACGTGGT GCTGCTGGAC ACCGCCGGGC GCCTGCACAA CAAGGCCGGC
CTGATGGACG AGCTGGCCAA GGTCAAGCGC GTGGTGGAGA AGCGCAGTCA GATCGACGAG
GTGCTGCTGG TGCTGGACGC CACCACCGGC CAGAACGGCA TGAAGCAGGC CGAGGTGTTC
AGCCAGGCGG TGGACGTCAC CGGCATCGTG CTGACGAAGA TGGACGGCAC CGCGCGCGGC
GGGATCGTGG TCGCGGTGCA GCGCGCGCTG GGTGTGCCGG TGAAACTGGT GGGCCTGGGC
GAGGGCGCCG ACGACCTGGC GCCCTTCGTG GCCACCGACT TCGTGGACGC CCTGCTCGAC
TGA
 
Protein sequence
MPEFLDTLTE QLVAGGLTLG LLGGGTWAWL RAKAGGGSST TEAPPEQEPR TTTRPPIEHT 
PAKKSTYGER TKGATMDFNR RTEPSDTTTA GPGVDKPTTG EGPTHLKERH TIPPMPVGGD
TDVAERPDVA ERPEPADRVD APAPGSATAP TTPRDEDRAE ADAADAPTTV EAPPSADGRL
VRLRARLSRS NNAVGQALLK LLTSGDLDEA AWEEVEDTLL ASDLGVEATT ELVDNLRKRV
QVENTTDPEL VRGWLREELV RLVDPTMERG IAATRQNGRP SVVLVVGVNG TGKTTTVGKI
ARVLVAEDKD VVLGAADTFR AAAADQLQTW GERVGVRTVR SEKEGADPAS VAFDAVREGL
ESEADVVLLD TAGRLHNKAG LMDELAKVKR VVEKRSQIDE VLLVLDATTG QNGMKQAEVF
SQAVDVTGIV LTKMDGTARG GIVVAVQRAL GVPVKLVGLG EGADDLAPFV ATDFVDALLD