Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_10890 |
Symbol | |
ID | 8372597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1111751 |
End bp | 1112455 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644991369 |
Product | uncharacterized LmbE-like protein |
Protein accession | YP_003148896 |
Protein GI | 256824936 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.0375606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.400819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCCCGC TCTCCCTGCC GGTCGTCGCC CCGGTGGCCG GGGCCCCGGT TCCCGCGGTG GACGGGGTGG TCCTGGTGCT GGGGGCCCAC CCCGACGACG AGACCGTGGG TGCAGGCCGC CTCGTCGCCC ACCTGGCCGC CCGGGGCAGG GTGGCCGCCC ACGTGGCGAC GGCGGGGGAG GGGTGCTTCG CCGGCCGGGA GACGCCGGGC GTGCCGGACG TGGGGGAGCT GCGCCGCAGT GAGTGGCGCG CGGCGGTGAC CGCCCTGGGG GCCGAGACCG GCAGGTGCGC CGGTCTGGCC GACGGCAGCC TGGCTCGACA CCCCGGCCGG GTGCGCGCCT GGGTGGCCGA GGTGGTCGAT GCCGTGGGCC CGGCCGTGCT CGTCGCGCCC TGGCAGCTCG ACCCGCACCC TGACCACGCG GCAACCGGCA GCGCGGCGGC ACGGGTGGCC CGTGAGCGGG GACTGACGCT CTGGGAGTAC CCGGTCTGGG CCCCGGCCTG GTGCACCCCC GAGCAGGTGG GGGCCAGCGG GTGGCGCCTG GAGGCCCGGT GGACCGATCC GTCGGCGACG GCAGCGCGGG CCGCCGCGCT GCGGTGCTAC CCCTCCCAGT TGCACGAGCT CGTTGCGGGG TGGGGCGCGG TCGTCCCCAC GGACGCCCTG GCCCACCACG CCCAGCAGCT CGTCTGTGTG CGGGAGGCGG CATGA
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Protein sequence | MSPLSLPVVA PVAGAPVPAV DGVVLVLGAH PDDETVGAGR LVAHLAARGR VAAHVATAGE GCFAGRETPG VPDVGELRRS EWRAAVTALG AETGRCAGLA DGSLARHPGR VRAWVAEVVD AVGPAVLVAP WQLDPHPDHA ATGSAAARVA RERGLTLWEY PVWAPAWCTP EQVGASGWRL EARWTDPSAT AARAAALRCY PSQLHELVAG WGAVVPTDAL AHHAQQLVCV REAA
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