Gene Ksed_10850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_10850 
Symbol 
ID8372593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1109156 
End bp1109719 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content72% 
IMG OID644991365 
Productpredicted metal-binding protein, possibly nucleic-acid binding 
Protein accessionYP_003148892 
Protein GI256824932 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.00522306 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.125771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC TCGACCGTCG ACACCCTCTG GCCCTTGACC TGCGCTCCTT CGGGCGACGC 
GCGGGCACCA TGGAGAACGG TGAGCTCGAC GTACCTGCTC CCGAGGGCAT CGGCACCGAC
GTGATGGCGA TCGCCGCGGG CTCGCCGCTG CACCTCGACC TGCGCCTGGA GTCGCTCGTC
GACGGTGTCC TGGCCTCCGG GACCGTCACC GGCACCGCCA CCGGGAGCTG CGTGCGCTGC
CTGACCGAGC TCGTCGAGGA GGTCGACGAG GACTTCCAGG TCCTGTACGT CTGGCCCGGT
GGCCGAGGTC CGGAGGCCGA GGAGGTCGAC CCCGAGACGC AGGAGGACGT GCGCGAGCTG
GACGGGGACC TGCTGGACCT CGAGCCCGCC GTGCGCGACG CGGTGGTGCC CGGCTTCCCC
TTCCAGCCGG TCTGCGCGCC GGACTGCCCG GGGCTGTGCG ACCGCTGCGG CGCGCGCCTG
GCTGATGACC CGGACCACGA GCACGACGAG ATCGACCCCC GCTGGGCGGC ACTGCAGCAG
CTGTCCGAGC GCGACGAGAA GTGA
 
Protein sequence
MIELDRRHPL ALDLRSFGRR AGTMENGELD VPAPEGIGTD VMAIAAGSPL HLDLRLESLV 
DGVLASGTVT GTATGSCVRC LTELVEEVDE DFQVLYVWPG GRGPEAEEVD PETQEDVREL
DGDLLDLEPA VRDAVVPGFP FQPVCAPDCP GLCDRCGARL ADDPDHEHDE IDPRWAALQQ
LSERDEK